PlantCAZyme

Basic Information
Species	Brassica rapa
Cazyme ID	Bra029010
Family	GT8
Protein Properties	Length: 265 Molecular Weight: 29917.6 Isoelectric Point: 9.667
Chromosome	Chromosome/Scaffold: 03 Start: 5859804 End: 5860737
Description	galacturonosyltransferase 12
View CDS

External Links
NCBI Taxonomy
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GT8	53	248	1.6e-26
CLALKLANEHSINAAARLQLPEAELVPTLVDNNYFHFVLASDNILAASVVAKKTYFPMQAWFSLHPLSPAIIEVKALHHFDWLSKGKVPVLEAMEKDQRV RSQFRSGSSVIAASKSENPVVVAAKLQAPSPKYNSLVNHIRNHLPELFPSLNKVVFLDDDIVIQTDLLPLWDIDMDGKVNGAVETCRGEDKFVMSK

Full Sequence
Protein Sequence Length: 265 Download
MSEVKRSKSD AREFAQKLKE MVTLMEQRTR TAKIQEYLYR HVASSSILKQ LHCLALKLAN 60 EHSINAAARL QLPEAELVPT LVDNNYFHFV LASDNILAAS VVAKKTYFPM QAWFSLHPLS 120 PAIIEVKALH HFDWLSKGKV PVLEAMEKDQ RVRSQFRSGS SVIAASKSEN PVVVAAKLQA 180 PSPKYNSLVN HIRNHLPELF PSLNKVVFLD DDIVIQTDLL PLWDIDMDGK VNGAVETCRG 240 EDKFVMSKKF KSYLNFSKPR NFDP* 300

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02829	PLN02829	8.0e-54	5	264	283	+ Probable galacturonosyltransferase
PLN02742	PLN02742	2.0e-55	17	264	271	+ Probable galacturonosyltransferase
PLN02867	PLN02867	4.0e-69	3	264	285	+ Probable galacturonosyltransferase
PLN02870	PLN02870	6.0e-110	1	264	288	+ Probable galacturonosyltransferase
PLN02659	PLN02659	4.0e-173	1	264	287	+ Probable galacturonosyltransferase

Gene Ontology
GO Term	Description
GO:0016757	transferase activity, transferring glycosyl groups

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
EMBL	CAN78125.1	0	2	264	142	427	hypothetical protein [Vitis vinifera]
EMBL	CBI20502.1	0	2	264	122	407	unnamed protein product [Vitis vinifera]
RefSeq	NP_200280.1	0	1	264	123	409	GAUT12 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana]
RefSeq	XP_002282637.1	0	2	264	123	408	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002522830.1	0	1	264	121	407	conserved hypothetical protein [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1ss9_A	0.007	187	235	80	128	A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc
PDB	1ga8_A	0.009	187	234	80	127	A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc
PDB	1g9r_A	0.009	187	234	80	127	A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose

Metabolic Pathways
Pathway Name	Reaction	EC	Protein Name
homogalacturonan biosynthesis	2.4.1.43-RXN	EC-2.4.1.43	polygalacturonate 4-α-galacturonosyltransferase

EST Download unfiltered results here

Hit	Length	Start	End	EValue
DW161142	280	7	263	0
CA917455	242	29	250	0
EY938653	228	1	208	0
EL902795	232	1	212	0
EY938653	37	205	241	0.00000000000005

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_002_00994.1	Aquca_006_00354.1	Aquca_013_00482.2	Aquca_013_00482.1	Aquca_006_00354.3
	Aquca_006_00354.2	Aquca_005_00362.2	Aquca_005_00362.1	Aquca_015_00356.1	Aquca_002_00928.1
	Aquca_008_00014.2	Aquca_008_00014.1	Aquca_015_00356.2	Aquca_002_00774.1	Aquca_005_00444.1
	Aquca_017_00613.2	Aquca_017_00613.1	Aquca_013_00482.3
Arabidopsis lyrata	497166	477468	486584	912279	478777
	312807	322297	480918	477431	326001
	495550	470701	902046	907363
Arabidopsis thaliana	AT3G25140.1	AT3G02350.1	AT3G61130.1	AT4G38270.2	AT4G38270.1
	AT5G47780.1	AT1G18580.1	AT2G46480.1	AT2G20810.1	AT3G01040.2
	AT3G01040.1	AT5G15470.1	AT5G54690.1	AT1G06780.2	AT1G06780.1
	AT2G30575.1	AT3G58790.1
Brachypodium distachyon	Bradi3g43810.1	Bradi1g12180.1	Bradi4g36050.1	Bradi1g29784.1	Bradi3g20550.2
	Bradi3g20550.1	Bradi4g33280.1	Bradi3g39270.1	Bradi5g23250.1	Bradi1g45210.1
	Bradi1g60010.1	Bradi4g03670.1	Bradi4g14910.1	Bradi1g70290.1	Bradi1g70290.2
	Bradi2g48710.1	Bradi3g59370.1
Brassica rapa	Bra015104	Bra013229	Bra021466	Bra001040	Bra007573
	Bra033560	Bra014349	Bra024910	Bra014453	Bra004535
	Bra025667	Bra016552	Bra015239	Bra006301	Bra039149
	Bra022739	Bra002963	Bra015529	Bra031537	Bra001025
	Bra023519	Bra008696	Bra007420	Bra003357	Bra021650
Carica papaya	evm.model.supercontig_43.115	evm.model.supercontig_70.2	evm.model.supercontig_20.219	evm.model.supercontig_27.191	evm.model.supercontig_18.164
	evm.model.supercontig_3.244	evm.model.supercontig_9.231	evm.model.supercontig_97.76	evm.model.supercontig_52.137	evm.model.supercontig_50.74
	evm.model.supercontig_14.153
Capsella rubella	Carubv10013367m	Carubv10013365m	Carubv10016785m	Carubv10006353m	Carubv10026096m
	Carubv10025515m	Carubv10008800m	Carubv10013424m	Carubv10016906m	Carubv10016905m
	Carubv10013435m	Carubv10027804m	Carubv10000686m	Carubv10008650m	Carubv10025075m
	Carubv10016997m
Citrus clementina	Ciclev10011396m	Ciclev10027946m	Ciclev10019146m	Ciclev10014562m	Ciclev10019659m
	Ciclev10014426m	Ciclev10020276m	Ciclev10014869m	Ciclev10011444m	Ciclev10019396m
	Ciclev10008578m	Ciclev10007975m	Ciclev10008973m	Ciclev10008241m	Ciclev10031800m
	Ciclev10031200m	Ciclev10032150m	Ciclev10032135m
Citrus sinensis	orange1.1g008561m	orange1.1g011612m	orange1.1g040435m	orange1.1g005684m	orange1.1g005683m
	orange1.1g007832m	orange1.1g006413m	orange1.1g006215m	orange1.1g011023m	orange1.1g009436m
	orange1.1g005035m	orange1.1g009572m	orange1.1g008157m	orange1.1g007412m	orange1.1g015279m
	orange1.1g009348m	orange1.1g011913m	orange1.1g007588m	orange1.1g011974m	orange1.1g007529m
	orange1.1g012480m	orange1.1g010187m	orange1.1g009468m	orange1.1g012380m	orange1.1g008524m
Cucumis sativus	Cucsa.078020.1	Cucsa.362990.3	Cucsa.362990.2	Cucsa.362990.1	Cucsa.099660.1
	Cucsa.044420.2	Cucsa.044420.1	Cucsa.180730.1	Cucsa.257890.1	Cucsa.007320.1
	Cucsa.198610.1	Cucsa.300840.1	Cucsa.174740.1	Cucsa.157950.3	Cucsa.157950.2
	Cucsa.157950.1	Cucsa.059680.1	Cucsa.388660.2	Cucsa.388660.1	Cucsa.139610.2
	Cucsa.139610.1
Eucalyptus grandis	Eucgr.K02133.1	Eucgr.I02091.1	Eucgr.E01335.2	Eucgr.E01335.1	Eucgr.D00963.4
	Eucgr.D00963.3	Eucgr.D00963.2	Eucgr.D00963.1	Eucgr.B00636.1	Eucgr.J01378.1
	Eucgr.B01494.1	Eucgr.I01979.1	Eucgr.F00995.2	Eucgr.F00995.1	Eucgr.A01962.1
Fragaria vesca	mrna17381.1-v1.0-hybrid	mrna19436.1-v1.0-hybrid	mrna04185.1-v1.0-hybrid	mrna19862.1-v1.0-hybrid	mrna17317.1-v1.0-hybrid
	mrna10269.1-v1.0-hybrid	mrna26124.1-v1.0-hybrid	mrna04333.1-v1.0-hybrid	mrna08199.1-v1.0-hybrid	mrna03305.1-v1.0-hybrid
	mrna24493.1-v1.0-hybrid
Glycine max	Glyma18g33210.1	Glyma08g46210.1	Glyma13g06990.1	Glyma19g05060.1	Glyma07g08910.2
	Glyma03g02250.2	Glyma18g45750.2	Glyma09g40260.1	Glyma05g09200.2	Glyma08g46210.2
	Glyma17g00782.2	Glyma17g00782.1	Glyma07g40011.1	Glyma09g01980.1	Glyma15g12900.1
	Glyma05g07410.2	Glyma05g07410.1	Glyma17g08910.1	Glyma13g37650.1	Glyma12g32820.1
	Glyma06g22730.1	Glyma04g31770.1	Glyma08g26480.1	Glyma18g49960.1	Glyma12g34280.1
	Glyma12g16550.1	Glyma13g36280.1	Glyma03g31590.2	Glyma03g31590.1	Glyma19g34420.3
	Glyma19g34420.2	Glyma19g34420.1	Glyma02g15990.1	Glyma10g03770.3	Glyma10g03770.2
	Glyma10g03770.1	Glyma06g41630.1	Glyma13g05950.4	Glyma13g05950.3	Glyma13g05950.2
	Glyma13g05950.1	Glyma19g03460.4	Glyma19g03460.3	Glyma19g03460.2	Glyma19g03460.1
	Glyma08g42280.1	Glyma18g12604.1	Glyma14g03110.1	Glyma02g45720.2	Glyma08g42280.3
	Glyma08g42280.2
Gossypium raimondii	Gorai.001G188500.6	Gorai.001G188500.5	Gorai.001G188500.4	Gorai.001G188500.3	Gorai.001G188500.2
	Gorai.001G188500.1	Gorai.001G104800.2	Gorai.001G104800.1	Gorai.008G059800.3	Gorai.008G059800.2
	Gorai.008G059800.1	Gorai.001G205700.2	Gorai.001G205700.1	Gorai.001G104800.3	Gorai.001G188500.7
	Gorai.013G063700.3	Gorai.013G063700.2	Gorai.013G063700.1	Gorai.001G172800.1	Gorai.004G155600.3
	Gorai.004G155600.2	Gorai.004G155600.1	Gorai.007G093500.1	Gorai.002G013600.1	Gorai.010G190800.5
	Gorai.010G190800.3	Gorai.010G190800.2	Gorai.010G190800.1	Gorai.012G131400.1	Gorai.007G040000.1
	Gorai.012G049900.4	Gorai.012G049900.2	Gorai.012G049900.1	Gorai.010G190800.4	Gorai.009G185300.1
	Gorai.002G082100.1	Gorai.007G081500.4	Gorai.007G081500.2	Gorai.007G081500.1	Gorai.013G164000.1
	Gorai.001G243400.1	Gorai.004G219100.1	Gorai.007G142400.1	Gorai.004G074600.1	Gorai.012G049900.3
	Gorai.007G081500.5	Gorai.007G081500.3	Gorai.002G082100.2	Gorai.013G164000.2	Gorai.012G042500.9
	Gorai.012G042500.8	Gorai.012G042500.7	Gorai.012G042500.6	Gorai.012G042500.5	Gorai.012G042500.3
	Gorai.012G042500.2	Gorai.012G042500.10	Gorai.012G042500.1	Gorai.012G042500.4
Linum usitatissimum	Lus10011834	Lus10022766	Lus10003045	Lus10009311	Lus10036540
	Lus10041389	Lus10026546	Lus10013832	Lus10038739	Lus10018554
	Lus10013506	Lus10007979	Lus10039119	Lus10032990	Lus10015379
	Lus10014750	Lus10033861	Lus10024859	Lus10018773	Lus10013189
	Lus10030703	Lus10035836	Lus10036619
Malus domestica	MDP0000120543	MDP0000132973	MDP0000922600	MDP0000290004	MDP0000261777
	MDP0000124691	MDP0000210431	MDP0000854555	MDP0000594960	MDP0000243946
	MDP0000467359	MDP0000256818	MDP0000303446	MDP0000252906	MDP0000160619
	MDP0000513437	MDP0000243968	MDP0000271287	MDP0000310017	MDP0000609623
	MDP0000312108	MDP0000238731	MDP0000195879	MDP0000281970	MDP0000168165
	MDP0000157869	MDP0000152152	MDP0000685698	MDP0000179747
Manihot esculenta	cassava4.1_004725m	cassava4.1_023788m	cassava4.1_004712m	cassava4.1_023909m	cassava4.1_003142m
	cassava4.1_002901m	cassava4.1_002719m	cassava4.1_003238m	cassava4.1_003647m	cassava4.1_005298m
	cassava4.1_005277m	cassava4.1_032323m	cassava4.1_005259m	cassava4.1_005287m	cassava4.1_005224m
	cassava4.1_004101m	cassava4.1_009287m	cassava4.1_007284m	cassava4.1_032123m
Medicago truncatula	Medtr7g055600.1	AC146721_1014.1	Medtr2g027740.1	Medtr3g107930.1	Medtr7g075840.1
	Medtr8g092000.2	Medtr8g092000.1	Medtr2g015550.1	Medtr2g006790.1	Medtr2g006760.1
	Medtr2g082650.2	Medtr2g082650.1	Medtr6g013840.1	Medtr4g133570.1	Medtr7g012370.1
Mimulus guttatus	mgv1a003761m	mgv1a003891m	mgv1a002354m	mgv1a002760m	mgv1a004359m
	mgv1a002625m	mgv1a004293m	mgv1a004534m	mgv1a004325m	mgv1a004326m
	mgv1a003230m	mgv1a004225m	mgv1a004198m	mgv1a004260m
Oryza sativa	LOC_Os02g29530.1	LOC_Os09g36190.2	LOC_Os09g36190.1	LOC_Os06g49810.1	LOC_Os09g36180.1
	LOC_Os10g21890.2	LOC_Os10g21890.1	LOC_Os06g51160.1	LOC_Os09g30280.1	LOC_Os08g38740.1
	LOC_Os08g23780.1	LOC_Os04g54360.1	LOC_Os03g30000.1	LOC_Os06g12280.1	LOC_Os02g51130.1
	LOC_Os12g38930.1	LOC_Os11g37980.1	LOC_Os03g11330.1	LOC_Os01g52710.1
Panicum virgatum	Pavirv00061950m	Pavirv00060594m	Pavirv00041812m	Pavirv00014771m	Pavirv00014770m
	Pavirv00014769m	Pavirv00053585m	Pavirv00009328m	Pavirv00008912m	Pavirv00039944m
	Pavirv00062614m	Pavirv00050016m	Pavirv00032585m	Pavirv00035093m	Pavirv00043038m
	Pavirv00067407m	Pavirv00055112m	Pavirv00015507m	Pavirv00065232m	Pavirv00066980m
	Pavirv00009329m	Pavirv00035094m	Pavirv00003326m	Pavirv00041981m	Pavirv00015393m
	Pavirv00007172m	Pavirv00031307m	Pavirv00065296m	Pavirv00016072m	Pavirv00033462m
	Pavirv00014352m	Pavirv00030037m	Pavirv00030036m	Pavirv00059245m	Pavirv00020743m
	Pavirv00020990m	Pavirv00031794m	Pavirv00031793m	Pavirv00024701m
Physcomitrella patens	Pp1s251_8V6.1	Pp1s128_25V6.1	Pp1s21_294V6.1	Pp1s507_8V6.4	Pp1s507_8V6.3
	Pp1s507_8V6.2	Pp1s507_8V6.1	Pp1s53_223V6.1	Pp1s72_167V6.1	Pp1s10_95V6.1
	Pp1s16_361V6.1	Pp1s18_97V6.1
Phaseolus vulgaris	Phvul.008G283600.1	Phvul.008G132200.1	Phvul.004G045900.1	Phvul.008G074000.1	Phvul.010G087600.1
	Phvul.009G115700.1	Phvul.003G088900.2	Phvul.003G088900.1	Phvul.006G135100.1	Phvul.009G203500.1
	Phvul.003G182500.1	Phvul.011G111900.1	Phvul.005G107500.1	Phvul.008G035400.1	Phvul.005G091200.1
	Phvul.001G157200.4	Phvul.001G157200.3	Phvul.001G157200.2	Phvul.001G157200.1	Phvul.007G177400.1
	Phvul.004G034200.2	Phvul.004G034200.1	Phvul.011G141200.1	Phvul.006G034100.1	Phvul.008G190700.1
	Phvul.008G190700.2
Picea abies	MA_9720735g0010	MA_12186g0010	MA_10431360g0010	MA_130739g0010	MA_110784g0010
	MA_938560g0010	MA_5732482g0010	MA_118674g0010	MA_10399g0020	MA_10508g0010
	MA_14268g0010	MA_7999321g0010
Populus trichocarpa	Potri.002G246500.1	Potri.017G106800.3	Potri.017G106800.2	Potri.017G106800.1	Potri.004G111000.2
	Potri.004G111000.1	Potri.008G010000.1	Potri.002G151400.2	Potri.002G151400.1	Potri.014G073800.5
	Potri.014G073800.4	Potri.014G073800.3	Potri.014G073800.2	Potri.014G073800.1	Potri.004G206000.3
	Potri.004G206000.2	Potri.004G206000.1	Potri.016G001700.3	Potri.016G001700.2	Potri.006G001100.2
	Potri.006G001100.1	Potri.016G001700.1	Potri.015G060800.3	Potri.015G060800.2	Potri.015G060800.1
	Potri.013G146200.1	Potri.019G108900.1	Potri.019G105100.1	Potri.012G064500.1	Potri.017G090800.1
	Potri.004G124500.2	Potri.004G124500.1	Potri.011G132600.1	Potri.001G416800.1	Potri.005G218900.2
	Potri.005G218900.1	Potri.014G142000.2	Potri.014G142000.1
Prunus persica	ppa003603m	ppa002418m	ppa018681m	ppa003250m	ppa005253m
	ppa004031m	ppa004063m	ppa004043m	ppa002758m	ppa023862m
	ppa004045m	ppa005810m
Ricinus communis	30217.m000251	29832.m000312	30174.m008932	30053.m000103	29805.m001535
	30138.m003935	29983.m003263	29630.m000787	29883.m002002	28166.m001056
	29993.m001048
Setaria italica	Si016867m	Si029123m	Si034827m	Si029152m	Si013390m
	Si015690m	Si009599m	Si009596m	Si009595m	Si035034m
	Si006285m	Si020048m	Si026393m	Si034955m	Si021715m
	Si001402m
Selaginella moellendorffii	111745	141437	230273	146475	440751
	268781
Sorghum bicolor	Sb04g020140.1	Sb02g030820.1	Sb01g011560.1	Sb10g030870.1	Sb02g027840.1
	Sb07g014890.1	Sb06g029980.1	Sb01g032570.1	Sb10g008060.1	Sb04g028010.1
	Sb04g036420.1	Sb05g022970.1	Sb08g019260.1	Sb03g033400.1
Thellungiella halophila	Thhalv10002465m	Thhalv10020416m	Thhalv10005820m	Thhalv10024734m	Thhalv10000819m
	Thhalv10007318m	Thhalv10001954m	Thhalv10020487m	Thhalv10013218m	Thhalv10013202m
	Thhalv10007109m	Thhalv10016398m	Thhalv10005879m
Vitis vinifera	GSVIVT01003922001	GSVIVT01036507001	GSVIVT01027574001	GSVIVT01023883001	GSVIVT01006978001
	GSVIVT01030583001	GSVIVT01008143001	GSVIVT01011500001	GSVIVT01014592001	GSVIVT01000744001
	GSVIVT01000800001
Zea mays	AC177908.3_FGT002	AC209664.3_FGT002

CAZyme Information