| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra029025 |
| Family | AA6 |
| Protein Properties | Length: 206 Molecular Weight: 21975.1 Isoelectric Point: 6.5247 |
| Chromosome | Chromosome/Scaffold: 03 Start: 5938153 End: 5939401 |
| Description | flavodoxin-like quinone reductase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 4 | 198 | 0 |
| KLYIVYYSMYGHVEKLAEEIRKGAASVEGVEAKLWQVPETLPEEVLSKMSAPPKSESPIITPNELTEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQ SLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMVFVPIGYTFGAGMFEMENVKGGSPYGAGTFAGDGSRQPTELELQQAFHQGKYIATITKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 206 Download |
| MATKLYIVYY SMYGHVEKLA EEIRKGAASV EGVEAKLWQV PETLPEEVLS KMSAPPKSES 60 PIITPNELTE ADGFVFGFPT RFGMMAAQFK AFLDATGGLW RTQSLAGKPA GIFYSTGSQG 120 GGQETTALTA ITQLVHHGMV FVPIGYTFGA GMFEMENVKG GSPYGAGTFA GDGSRQPTEL 180 ELQQAFHQGK YIATITKKLK GSTTA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 8.0e-9 | 7 | 113 | 118 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 1.0e-11 | 17 | 146 | 134 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 2.0e-36 | 1 | 201 | 208 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 2.0e-62 | 3 | 199 | 198 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 6.0e-75 | 3 | 201 | 200 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050662 | coenzyme binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_194457.2 | 0 | 1 | 205 | 1 | 205 | quinone reductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_200261.1 | 0 | 1 | 203 | 1 | 203 | FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1); FMN binding / oxidoreductase, acting on NADH or NADPH, quinone or similar compound as acceptor [Arabidopsis thaliana] |
| RefSeq | XP_002283286.1 | 0 | 1 | 200 | 1 | 200 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319258.1 | 0 | 1 | 202 | 1 | 202 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534445.1 | 0 | 1 | 202 | 1 | 202 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 4 | 201 | 2 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 4 | 201 | 2 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 4 | 201 | 3 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 4 | 201 | 3 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 4 | 201 | 3 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY418488 | 206 | 1 | 206 | 0 |
| EX097043 | 206 | 1 | 206 | 0 |
| EV551435 | 206 | 1 | 206 | 0 |
| EY900587 | 206 | 1 | 206 | 0 |
| EX100354 | 206 | 1 | 206 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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