| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra029171 |
| Family | AA1 |
| Protein Properties | Length: 586 Molecular Weight: 65519.2 Isoelectric Point: 7.7053 |
| Chromosome | Chromosome/Scaffold: 03 Start: 6679583 End: 6681956 |
| Description | SKU5 similar 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 43 | 512 | 0 |
| QQVIAVNGIFPGPVVTATTNYNVEVNVFNRLDEPLLLTWNGIEMRRNSWQDGVLGTNCPIPPQWNFTYSFQVKDQIGSFFYFPSLNFQRASGGFGPIVID NQYRIPLPFATPDGEFTFMIGDWYTQNHTVLRSVLDSGKELAMPDGVLINGKGPYKYNSSVPDGIQHETVNVDPGKTYRIRVHNVGVSTSLNFRIQSHKL LLVETEGRYTSQTNFTDFDIHVGQSYSFLVTMDQNASSDYYIVASARFVDEEVWQRVTGVGILHYSNSKGPASGPLPVPLTDVSHPWTVMNQQRAIKQNT SSSGARPNPQGSYHYGQINITGTYIFRSMPPTIINGSLRATLNGVSFLNPSTPMRLADKHRVKGVYKMDFPSRPVDSRPPRVGSSIINATYRRFVQIIFQ NNDTKVQSFHIDGYSFYVVAMDFGNWTEDRKGSYNNWDAIARSTVEVYPGAWTAVLMSLDNAGVWNLRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MPPPRFSIFA FALLFGLSLA EDPAISYVYE LSYVTASPLG VPQQVIAVNG IFPGPVVTAT 60 TNYNVEVNVF NRLDEPLLLT WNGIEMRRNS WQDGVLGTNC PIPPQWNFTY SFQVKDQIGS 120 FFYFPSLNFQ RASGGFGPIV IDNQYRIPLP FATPDGEFTF MIGDWYTQNH TVLRSVLDSG 180 KELAMPDGVL INGKGPYKYN SSVPDGIQHE TVNVDPGKTY RIRVHNVGVS TSLNFRIQSH 240 KLLLVETEGR YTSQTNFTDF DIHVGQSYSF LVTMDQNASS DYYIVASARF VDEEVWQRVT 300 GVGILHYSNS KGPASGPLPV PLTDVSHPWT VMNQQRAIKQ NTSSSGARPN PQGSYHYGQI 360 NITGTYIFRS MPPTIINGSL RATLNGVSFL NPSTPMRLAD KHRVKGVYKM DFPSRPVDSR 420 PPRVGSSIIN ATYRRFVQII FQNNDTKVQS FHIDGYSFYV VAMDFGNWTE DRKGSYNNWD 480 AIARSTVEVY PGAWTAVLMS LDNAGVWNLR VENLDRWYLG QETYIRIINP EENGKTEMGQ 540 PKNVLYCGAL KSLQKQQVHS SASSLLNGNL ILIFSFLMVL LASVC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00044 | PLN00044 | 0 | 22 | 559 | 543 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 21 | 561 | 544 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 21 | 548 | 528 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 23 | 548 | 537 | + copper ion binding / pectinesterase | ||
| PLN02991 | PLN02991 | 0 | 21 | 548 | 528 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA23065.1 | 0 | 8 | 555 | 12 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
| RefSeq | NP_194254.2 | 0 | 8 | 569 | 12 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_199961.1 | 0 | 13 | 583 | 16 | 587 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002318885.1 | 0 | 8 | 582 | 14 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510943.1 | 0 | 5 | 584 | 8 | 588 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 553 | 6 | 545 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asq_A | 0 | 27 | 553 | 6 | 545 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_B | 0 | 27 | 553 | 6 | 545 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_A | 0 | 27 | 553 | 6 | 545 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1aso_B | 0 | 27 | 553 | 6 | 545 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
