| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra029541 |
| Family | GT48 |
| Protein Properties | Length: 1769 Molecular Weight: 204910 Isoelectric Point: 9.4363 |
| Chromosome | Chromosome/Scaffold: 09 Start: 17204358 End: 17209757 |
| Description | glucan synthase-like 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 871 | 1624 | 0 |
| VPKNLEARERLAFFSNSLFMNMPQAPSVEKMLAFSVLTPYYDEEVMYRQEMLRAENEDGISTLFYLQKIYADEWVNFVERMRREGVENENDIWTQKVRDL RLWASYRGQTLSRTVRGMMYYYSALKKLAFLDSASEMDISMGTQIAPEPPRSYYTRDGGDNILQPTASQEISRMANGIGHLFKGSESGSAMMKFTYVVAC QVYGQHKAKGDHRAEEILFLMKSHEALRIAYVDEVNLGLGNVEYYSVLVKFDQRLQREVEIYRIRLPGPLKLGEGKPENQNHAIIFTRGDAIQTIDMNQD NHFEEALKMRNLLESFKKNYGIRKPTILGVREKVFTGSVSSLAWFMSSQETSFVTLGQRVLANPLKVRMHYGHPDVFDRFWFIPRGGISKASRVINISED IFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQISMFEAKVASGNGEQALSRDVYRLGHRLDFFRMLSFFYTTVGYYFNTMLIVFTVYAFLWGRLYLALSG VEKIAKDRSSSNEALGAILNQQFVIQLGLFTALPMILENSLERGFLPAIWDFITMQLQLASFFYTFSLGTRSHYFGRTILHGGAKYRATGRGFVVEHKKF AENYRLYARTHFIKAIELAIILLVYAAYSPLAKSSLVYILMTISSWFLITSWIISPFLFNPSGFDWLKTVYDFDDFMNWLWSRGGLFTKADQSWFTWWNE EQDHLKTTGVWGKLLEILLDLRFFFFQYSIVYHLRIADGQTSIGVYLVSWGCII | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1769 Download |
| MSMRPRPSPA TAHAPSQEVY NIIPIHDFLT EHPSLRYPEV RAAAAALKVV GDLAKPPFVD 60 FTPRMDLMDW LGLLFGFQLD NVRNQRENLV LHLANSQMRL QPPPLHPDGL DPTVLRRFRK 120 KLLRNYTNWC SFLGVRCHVT SPAHSRHQTN VVLNLRRELL YVALYLLIWG ESANLRFMPE 180 CICYIFHHMA MELNKVLGGE FDDMTGMPYW PSFSGDCAYL KSVVMPIYRT VKTEVESSNN 240 GTKPHSAWRN YDDINEYFWR KRALKSLKWP LDCTSNFFDT TPKSSRVGKT GFVEQRSFWN 300 VFRSFDRLWI LLLLYLQAAI IVATSRVKYP WQDKDVEVAL LTVFITWAGL RLLQSVLDAS 360 TQYSLVGRET FWLFVRLILK VLVAVTWTVL FSVFYARIWS QKNKDGLWSQ AANDRIIVFL 420 KVVFVYVIPE MLALVLFIVP CIRNWVEELN LGIVYFFTWW FYSKSFVGRG LREGLVDNVK 480 YSIFWIVVLA TKFIFSYFLQ IRPLIKPTRA LLNLKNAPYN WHEFFGSTHR IAVVMLWLPV 540 ILVYLMDLQI WYSIYSSLVG ATIGLFSHLG EIRNIDQLRL RFQFFSSAMQ FNLKPEERLL 600 GPKATVLKKA RDAIHRLKLR YGIGQPFNKI ESSQVEATWF ALLWNEIILT FREEDLISDR 660 EVELLELPPN CWNIQVIRWP CFLLCNELLL ALSQANELCD APDRWLWSKI CSSEYRRCAV 720 IEAFDSIKFV IRKIVKNGTE EESIVNRLLN EIDENVESRK VTEVYKLTVL LRIHEKLISL 780 LERLMDPDKK VFRIVNILQA LYELCAWEFP RIRRSTQQLR QLGLAPVSLN ADTELLFVNA 840 INLPPPGDVV FYRQIRRVHT ILTSRDPMHN VPKNLEARER LAFFSNSLFM NMPQAPSVEK 900 MLAFSVLTPY YDEEVMYRQE MLRAENEDGI STLFYLQKIY ADEWVNFVER MRREGVENEN 960 DIWTQKVRDL RLWASYRGQT LSRTVRGMMY YYSALKKLAF LDSASEMDIS MGTQIAPEPP 1020 RSYYTRDGGD NILQPTASQE ISRMANGIGH LFKGSESGSA MMKFTYVVAC QVYGQHKAKG 1080 DHRAEEILFL MKSHEALRIA YVDEVNLGLG NVEYYSVLVK FDQRLQREVE IYRIRLPGPL 1140 KLGEGKPENQ NHAIIFTRGD AIQTIDMNQD NHFEEALKMR NLLESFKKNY GIRKPTILGV 1200 REKVFTGSVS SLAWFMSSQE TSFVTLGQRV LANPLKVRMH YGHPDVFDRF WFIPRGGISK 1260 ASRVINISED IFAGFNCTLR GGNVTHHEYI QVGKGRDVGL NQISMFEAKV ASGNGEQALS 1320 RDVYRLGHRL DFFRMLSFFY TTVGYYFNTM LIVFTVYAFL WGRLYLALSG VEKIAKDRSS 1380 SNEALGAILN QQFVIQLGLF TALPMILENS LERGFLPAIW DFITMQLQLA SFFYTFSLGT 1440 RSHYFGRTIL HGGAKYRATG RGFVVEHKKF AENYRLYART HFIKAIELAI ILLVYAAYSP 1500 LAKSSLVYIL MTISSWFLIT SWIISPFLFN PSGFDWLKTV YDFDDFMNWL WSRGGLFTKA 1560 DQSWFTWWNE EQDHLKTTGV WGKLLEILLD LRFFFFQYSI VYHLRIADGQ TSIGVYLVSW 1620 GCIIGIAAIY ITTIYAQKRF SVKEHIKYRF IQFLVIWLTV LVVVLMLQFT KLTVVDLLIS 1680 LLAFIPTGWG LISIAQVLRP FLISTVVWDT VISVARLYDL CFGLIVMAPV ALLSWLPGFQ 1740 NMQTRILFNE AFSRGLQISI ILAGKKSA* 1800 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14288 | FKS1_dom1 | 5.0e-54 | 156 | 272 | 117 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 869 | 1620 | 813 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB84371.1 | 0 | 18 | 1767 | 23 | 1766 | 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] |
| RefSeq | NP_001044278.1 | 0 | 17 | 1767 | 22 | 1787 | Os01g0754200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_192264.1 | 0 | 6 | 1767 | 14 | 1776 | ATGSL05 (GLUCAN SYNTHASE-LIKE 5); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_567278.1 | 0 | 4 | 1768 | 3 | 1768 | GSL1 (GLUCAN SYNTHASE-LIKE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002517915.1 | 0 | 4 | 1767 | 7 | 1767 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
