PlantCAZyme

Basic Information
Species	Brassica rapa
Cazyme ID	Bra029583
Family	GH100
Protein Properties	Length: 653 Molecular Weight: 73682.2 Isoelectric Point: 8.3018
Chromosome	Chromosome/Scaffold: 05 Start: 23155112 End: 23158798
Description	Plant neutral invertase family protein
View CDS

External Links
NCBI Taxonomy
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH100	165	623	0
SEAEREAWRLLRGAVVNYCGFPVGTVAANDPGDKQKTLNYDQVFIRDFVPSAYAFLLDGDGEIVRNFLLQTLQLQSWEKTVDCHSPGPGLMPASFKVKSL EGNDGSFEECLDADFGESAIGRVSPVDSGLWWIILLRAYGKLTGDYTLQERIDVQTGIKLILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQA LFYSSLRCAREMLNVNDETKNLVAAVNSRLSALSFHIREYYWVDIKKINEIYRYNTEEYSADATNKFNIYPEQIPSWLVDWIPNRGGYFIGNLQPAHMDF RFFTLGNLWAVVSSLGSQEQNEGVMALIEEKWDDLVANMPLKICFPALEQEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMEKLDLAKKAVAV AEKRLKEDQWPEYYDTKSGRFVGKQSRLYQTWTNAGFLASKKLIEQPEKASLLFWEEDY

Full Sequence
Protein Sequence Length: 653 Download
MMMTSRSCIC VSAMKPCCRF LISFKSSSLF GVSPTSSSRL INSSKLLQCR KIESRSIRSG 60 VHCRRRNVFC NSDSISWGGS RCSSSIGRGR GRGILVIPRV ASDFRNQSSS SSLDSHVNKD 120 KSFESLFVKP LVFKEIPKKE SGGKEDAKFG NVRVKGEREE VSSQSEAERE AWRLLRGAVV 180 NYCGFPVGTV AANDPGDKQK TLNYDQVFIR DFVPSAYAFL LDGDGEIVRN FLLQTLQLQS 240 WEKTVDCHSP GPGLMPASFK VKSLEGNDGS FEECLDADFG ESAIGRVSPV DSGLWWIILL 300 RAYGKLTGDY TLQERIDVQT GIKLILKLCL ADGFDMFPTL LVTDGSCMID RRMGIHGHPL 360 EIQALFYSSL RCAREMLNVN DETKNLVAAV NSRLSALSFH IREYYWVDIK KINEIYRYNT 420 EEYSADATNK FNIYPEQIPS WLVDWIPNRG GYFIGNLQPA HMDFRFFTLG NLWAVVSSLG 480 SQEQNEGVMA LIEEKWDDLV ANMPLKICFP ALEQEEWRII TGSDPKNTPW SYHNGGSWPT 540 LLWQFTLACI KMEKLDLAKK AVAVAEKRLK EDQWPEYYDT KSGRFVGKQS RLYQTWTNAG 600 FLASKKLIEQ PEKASLLFWE EDYQLLETCV CGLNKSSGKK KNKCSRFTPP RS* 660

Full Sequence

Protein Sequence Length: 653 Download

MMMTSRSCIC VSAMKPCCRF LISFKSSSLF GVSPTSSSRL INSSKLLQCR KIESRSIRSG    60
VHCRRRNVFC NSDSISWGGS RCSSSIGRGR GRGILVIPRV ASDFRNQSSS SSLDSHVNKD    120
KSFESLFVKP LVFKEIPKKE SGGKEDAKFG NVRVKGEREE VSSQSEAERE AWRLLRGAVV    180
NYCGFPVGTV AANDPGDKQK TLNYDQVFIR DFVPSAYAFL LDGDGEIVRN FLLQTLQLQS    240
WEKTVDCHSP GPGLMPASFK VKSLEGNDGS FEECLDADFG ESAIGRVSPV DSGLWWIILL    300
RAYGKLTGDY TLQERIDVQT GIKLILKLCL ADGFDMFPTL LVTDGSCMID RRMGIHGHPL    360
EIQALFYSSL RCAREMLNVN DETKNLVAAV NSRLSALSFH IREYYWVDIK KINEIYRYNT    420
EEYSADATNK FNIYPEQIPS WLVDWIPNRG GYFIGNLQPA HMDFRFFTLG NLWAVVSSLG    480
SQEQNEGVMA LIEEKWDDLV ANMPLKICFP ALEQEEWRII TGSDPKNTPW SYHNGGSWPT    540
LLWQFTLACI KMEKLDLAKK AVAVAEKRLK EDQWPEYYDT KSGRFVGKQS RLYQTWTNAG    600
FLASKKLIEQ PEKASLLFWE EDYQLLETCV CGLNKSSGKK KNKCSRFTPP RS*           660

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam06202	GDE_C	0.006	290	406	138	+ Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).
pfam12899	Glyco_hydro_100	0	170	611	442	+ Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853.
PLN02703	PLN02703	0	150	628	481	+ beta-fructofuranosidase
PLN03005	PLN03005	0	170	625	458	+ beta-fructofuranosidase
PLN02973	PLN02973	0	170	625	456	+ beta-fructofuranosidase

Gene Ontology
GO Term	Description
GO:0004135	amylo-alpha-1,6-glucosidase activity
GO:0005978	glycogen biosynthetic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	AAG51337.1	0	126	652	1	536	AC020580_17 neutral invertase, putative; 73674-70896 [Arabidopsis thaliana]
GenBank	AAP40464.1	0	3	652	1	664	putative neutral invertase [Arabidopsis thaliana]
DDBJ	BAE98459.1	0	3	652	1	664	putative neutral invertase [Arabidopsis thaliana]
RefSeq	NP_187302.2	0	3	652	1	664	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana]
RefSeq	XP_002519277.1	0	3	648	1	679	beta-fructofuranosidase, putative [Ricinus communis]

EST Download unfiltered results here

Hit	Length	Start	End	EValue
HO811217	464	165	626	0
HO466454	460	170	629	0
HO779905	386	247	630	0
DV161952	311	242	552	0
EL455256	312	165	474	0

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_073_00008.3	Aquca_073_00008.2	Aquca_073_00008.1	Aquca_086_00036.1	Aquca_004_00040.2
	Aquca_004_00040.1	Aquca_003_00442.1	Aquca_073_00027.1
Arabidopsis lyrata	489803	491170	472504	891210	316170
	489110	474815	896781	896678	920675
	332600
Arabidopsis thaliana	AT4G34860.2	AT4G34860.1	AT4G09510.1	AT1G22650.1	AT1G72000.1
	AT1G35580.2	AT1G35580.1	AT4G09510.2	AT1G35580.3	AT5G22510.1
	AT1G56560.1	AT3G06500.1	AT3G05820.1
Brachypodium distachyon	Bradi3g45530.1	Bradi5g10357.1	Bradi4g24470.1	Bradi3g02560.1	Bradi4g24470.2
	Bradi2g12427.1	Bradi5g09200.1	Bradi3g44770.1	Bradi1g64150.1
Brassica rapa	Bra011567	Bra034661	Bra034659	Bra024527	Bra000681
	Bra016091	Bra034413	Bra036761	Bra002417	Bra038926
	Bra040252
Carica papaya	evm.model.supercontig_37.198	evm.model.supercontig_66.27	evm.model.supercontig_48.185	evm.model.supercontig_19.1
Capsella rubella	Carubv10004468m	Carubv10000493m	Carubv10021707m	Carubv10012014m	Carubv10009286m
	Carubv10000472m	Carubv10020003m	Carubv10013138m	Carubv10015452m	Carubv10000738m
Citrus clementina	Ciclev10030393m	Ciclev10023282m	Ciclev10028002m	Ciclev10030926m	Ciclev10030925m
	Ciclev10004474m	Ciclev10000500m	Ciclev10003220m
Citrus sinensis	orange1.1g035779m	orange1.1g048475m	orange1.1g006338m	orange1.1g006332m	orange1.1g006329m
	orange1.1g006328m	orange1.1g006324m	orange1.1g006488m	orange1.1g005783m	orange1.1g006131m
	orange1.1g015270m	orange1.1g045990m	orange1.1g008699m	orange1.1g013067m	orange1.1g007986m
	orange1.1g008801m	orange1.1g010424m	orange1.1g016169m	orange1.1g035960m
Cucumis sativus	Cucsa.381840.1	Cucsa.079400.1	Cucsa.309020.1	Cucsa.252410.1	Cucsa.090510.1
	Cucsa.252410.2
Eucalyptus grandis	Eucgr.G01751.1	Eucgr.F02588.1	Eucgr.F01661.1	Eucgr.D02386.1	Eucgr.G02704.2
	Eucgr.G02704.1	Eucgr.J00457.3	Eucgr.J00457.2	Eucgr.J00457.1	Eucgr.B03984.1
	Eucgr.H03308.1	Eucgr.H03308.2	Eucgr.G02704.3
Fragaria vesca	mrna07792.1-v1.0-hybrid	mrna08524.1-v1.0-hybrid	mrna07379.1-v1.0-hybrid	mrna18695.1-v1.0-hybrid	mrna05019.1-v1.0-hybrid
	mrna00239.1-v1.0-hybrid	mrna22002.1-v1.0-hybrid.383.643	mrna22002.1-v1.0-hybrid.383.643	mrna22002.1-v1.0-hybrid.156.364	mrna22002.1-v1.0-hybrid.156.364
	mrna26695.1-v1.0-hybrid
Glycine max	Glyma10g35890.4	Glyma10g35890.3	Glyma20g31730.2	Glyma20g31730.1	Glyma12g02690.2
	Glyma04g00750.5	Glyma04g00750.4	Glyma04g00750.3	Glyma04g00750.2	Glyma06g00770.3
	Glyma06g00770.2	Glyma05g31920.2	Glyma05g31920.1	Glyma08g15220.1	Glyma20g22780.1
	Glyma10g28640.1	Glyma17g04160.1	Glyma07g36440.1	Glyma03g38970.2	Glyma19g41500.2
	Glyma17g04160.2	Glyma11g10400.2.237.371	Glyma11g10400.2.237.371
Gossypium raimondii	Gorai.005G252100.2	Gorai.005G252100.1	Gorai.013G139600.2	Gorai.013G139600.1	Gorai.006G130500.3
	Gorai.006G130500.2	Gorai.006G130500.1	Gorai.009G289200.1	Gorai.002G123500.1	Gorai.004G151200.1
	Gorai.007G110200.1	Gorai.006G130500.4	Gorai.009G289200.2	Gorai.006G110700.1	Gorai.011G203600.1
	Gorai.002G145500.6	Gorai.002G145500.5	Gorai.002G145500.4	Gorai.002G145500.3	Gorai.002G145500.2
	Gorai.002G145500.1	Gorai.013G208200.2	Gorai.013G208200.1	Gorai.012G023500.1	Gorai.004G235500.1
	Gorai.007G308100.1	Gorai.013G130600.1	Gorai.006G110700.2	Gorai.011G203600.2	Gorai.006G110700.3
	Gorai.002G145500.7	Gorai.004G235500.2	Gorai.004G235500.4	Gorai.004G235500.3
Linum usitatissimum	Lus10042390	Lus10033144	Lus10026284	Lus10034525	Lus10014824
	Lus10016938	Lus10006078	Lus10019532	Lus10043375	Lus10037817
	Lus10017095	Lus10010900	Lus10031431	Lus10009441.256.528	Lus10009441.256.528
	Lus10009441.88.195	Lus10009441.88.195
Malus domestica	MDP0000163452	MDP0000319075	MDP0000186866	MDP0000849174	MDP0000531557
	MDP0000146680	MDP0000297851	MDP0000652278	MDP0000133399	MDP0000095481
	MDP0000315220	MDP0000275203	MDP0000261740	MDP0000798088	MDP0000133829
	MDP0000291284
Manihot esculenta	cassava4.1_005201m	cassava4.1_004783m	cassava4.1_004474m	cassava4.1_004633m	cassava4.1_022884m
	cassava4.1_003659m	cassava4.1_003155m	cassava4.1_002913m	cassava4.1_021277m	cassava4.1_002971m
	cassava4.1_025660m
Medicago truncatula	Medtr1g096140.1	Medtr1g095970.1	Medtr3g117710.1	Medtr8g092170.1	Medtr1g084610.1
	Medtr3g015100.1
Mimulus guttatus	mgv1a005865m	mgv1a003765m	mgv1a023298m	mgv1a002815m	mgv1a005735m
	mgv1a002478m	mgv1a002839m	mgv1a002360m	mgv1a006717m
Oryza sativa	LOC_Os02g34560.1	LOC_Os04g35280.1	LOC_Os11g07440.3	LOC_Os11g07440.1	LOC_Os02g03320.1
	LOC_Os02g34560.2	LOC_Os11g07440.4	LOC_Os11g07440.2	LOC_Os02g32730.1	LOC_Os01g22900.1
	LOC_Os03g20020.1	LOC_Os04g33490.1	LOC_Os01g22900.3	LOC_Os01g22900.2
Panicum virgatum	Pavirv00040169m	Pavirv00015193m	Pavirv00065954m	Pavirv00063699m	Pavirv00064389m
	Pavirv00045650m	Pavirv00000123m	Pavirv00050023m	Pavirv00060635m	Pavirv00019972m
	Pavirv00039825m	Pavirv00059532m	Pavirv00039824m	Pavirv00017654m	Pavirv00063916m
	Pavirv00053033m.234.378	Pavirv00053033m.234.378
Physcomitrella patens	Pp1s227_41V6.1	Pp1s261_25V6.1	Pp1s32_177V6.1	Pp1s333_36V6.1	Pp1s245_40V6.1
	Pp1s15_44V6.1	Pp1s279_35V6.1	Pp1s313_22V6.1
Phaseolus vulgaris	Phvul.007G091300.1	Phvul.009G000400.1	Phvul.002G266600.1	Phvul.007G203100.1	Phvul.001G224200.1
	Phvul.003G118400.1
Picea abies	MA_7394g0010	MA_10436888g0010	MA_116385g0010	MA_89855g0010	MA_10427675g0010
	MA_10427685g0010	MA_10429278g0010.102.302	MA_10429278g0010.102.302	MA_458344g0010	MA_10425903g0010
	MA_3665942g0010	MA_6692890g0010	MA_10309672g0010	MA_182953g0010	MA_10429278g0010.338.431
	MA_10429278g0010.338.431
Populus trichocarpa	Potri.004G167500.1	Potri.013G110800.1	Potri.019G082000.3	Potri.019G082000.2	Potri.019G082000.1
	Potri.009G129000.1	Potri.005G239400.1	Potri.002G173600.1	Potri.004G186500.1	Potri.010G236100.1
	Potri.008G024100.2	Potri.008G024100.1	Potri.008G101500.3	Potri.008G101500.2	Potri.008G101500.1
	Potri.013G006600.1	Potri.005G010800.2	Potri.005G010800.1	Potri.004G186500.2	Potri.013G006600.2
	Potri.010G236100.2
Prunus persica	ppa004112m	ppa003483m	ppa003670m	ppa025225m	ppa002149m
	ppa002625m	ppa002614m	ppa002847m	ppa002385m	ppa019684m
	ppa014917m	ppa018196m	ppb023165m
Ricinus communis	29728.m000799	29836.m000583	29791.m000546	29766.m000116	29889.m003349
	30128.m008935	29711.m000330.251.521	29711.m000330.251.521	30170.m014184.294.480	30170.m014184.294.480
	30170.m014184.135.293	30170.m014184.135.293	56962.m000055	29711.m000330.112.229	29711.m000330.112.229
	56962.m000054
Setaria italica	Si016798m	Si009717m	Si026182m	Si016786m	Si016890m
	Si016691m	Si000681m	Si034714m	Si009683m
Selaginella moellendorffii	111393	89558	151264	267827	443960
Sorghum bicolor	Sb04g022350.1	Sb04g029440.1	Sb05g004770.1	Sb04g002180.1	Sb03g013420.1
	Sb04g021550.1	Sb01g037120.1	Sb02g032885.1
Thellungiella halophila	Thhalv10024783m	Thhalv10028553m	Thhalv10007305m	Thhalv10001814m	Thhalv10019647m
	Thhalv10012973m	Thhalv10020219m	Thhalv10023341m	Thhalv10020291m	Thhalv10017815m
Vitis vinifera	GSVIVT01009904001	GSVIVT01034488001	GSVIVT01027176001	GSVIVT01024105001	GSVIVT01037430001
	GSVIVT01031374001	GSVIVT01034944001	GSVIVT01031267001	GSVIVT01037429001	GSVIVT01034754001
	GSVIVT01034753001

CAZyme Information