| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra029584 |
| Family | GH1 |
| Protein Properties | Length: 616 Molecular Weight: 69916.2 Isoelectric Point: 8.6797 |
| Chromosome | Chromosome/Scaffold: 05 Start: 23151077 End: 23154001 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 122 | 510 | 0 |
| GKEDNTVADSTPTKNVAAWHNTPHAEVRLKFWSDPDQEVKLAKDTGVTVFRMGVDWCRIMPKEPTKGIEEAVDYEALEHYKWILNRVRSNGMKVMLTLFH HSLPPWAADYGGWKMEKTVDYFMDFTRLVVDSMFDLVDSWITFNEPHVFAMLTYMAGTWPGNTPDFLEMATSTLPMGVFHRVMHWMAVAHSKAYDYIHAK TSLEKPLVGVAHHVSFMRPYGLFDVGSVTFSNSLTMFSFIDSICEKLDFIGINYYGQEAVCGVGLKLVETDEYSESGRGVYPDGLYRVLLMFHQRYKHLN VPFIVTENGVSDETDVIRRPYMIEHLLALYAAMLKGVPVLGYIFWTISDNWEWADGYGPKFGLVAVDRANNLARTVRPSYHLFTKIVKS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 616 Download |
| MSILTLLVKI AGLLGTITVG ANAVSYSRFR RRNLRNFRSP IDESKEVLAD FTSQEHNEGK 60 FFFGLATAPA HAEDDLDDAW IRFAKETPCS AEDEEDKKAK RKKKVKLAVG AITKGLAKNT 120 QGKEDNTVAD STPTKNVAAW HNTPHAEVRL KFWSDPDQEV KLAKDTGVTV FRMGVDWCRI 180 MPKEPTKGIE EAVDYEALEH YKWILNRVRS NGMKVMLTLF HHSLPPWAAD YGGWKMEKTV 240 DYFMDFTRLV VDSMFDLVDS WITFNEPHVF AMLTYMAGTW PGNTPDFLEM ATSTLPMGVF 300 HRVMHWMAVA HSKAYDYIHA KTSLEKPLVG VAHHVSFMRP YGLFDVGSVT FSNSLTMFSF 360 IDSICEKLDF IGINYYGQEA VCGVGLKLVE TDEYSESGRG VYPDGLYRVL LMFHQRYKHL 420 NVPFIVTENG VSDETDVIRR PYMIEHLLAL YAAMLKGVPV LGYIFWTISD NWEWADGYGP 480 KFGLVAVDRA NNLARTVRPS YHLFTKIVKS GKITRNDRSL AWEELQKAAK AGKVRPFYRA 540 VDNHGLMYAD GLDKPQGRQF VDRDWRFGHY QVDGLQDPLS RLARALLIWP AITKKKIRKV 600 KVKHTDESGL ALQPA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13511 | PRK13511 | 3.0e-23 | 152 | 488 | 416 | + 6-phospho-beta-galactosidase; Provisional | ||
| TIGR01233 | lacG | 2.0e-23 | 152 | 488 | 399 | + 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| TIGR03356 | BGL | 1.0e-49 | 158 | 504 | 390 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 9.0e-54 | 157 | 510 | 410 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 1.0e-59 | 152 | 514 | 419 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51335.1 | 0 | 1 | 615 | 1 | 612 | AC020580_15 beta-glucosidase, putative; 69917-66834 [Arabidopsis thaliana] |
| GenBank | AAM65250.1 | 0 | 1 | 615 | 1 | 616 | beta-glucosidase, putative [Arabidopsis thaliana] |
| EMBL | CAD36513.1 | 0 | 1 | 615 | 1 | 616 | mutant putative beta-glycosidase [Arabidopsis thaliana] |
| RefSeq | NP_001118591.1 | 0 | 1 | 615 | 1 | 650 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_566285.1 | 0 | 1 | 615 | 1 | 616 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4ha4_A | 3.9937e-43 | 152 | 514 | 59 | 469 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4ha3_A | 3.9937e-43 | 152 | 514 | 59 | 469 | A Chain A, Structure Of Beta-Glycosidase From Acidilobus Saccharovorans In Complex With Tris |
| PDB | 3apg_D | 4e-39 | 152 | 521 | 58 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_C | 4e-39 | 152 | 521 | 58 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_B | 4e-39 | 152 | 521 | 58 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
