| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra029615 |
| Family | GT1 |
| Protein Properties | Length: 620 Molecular Weight: 67283.5 Isoelectric Point: 6.4048 |
| Chromosome | Chromosome/Scaffold: 05 Start: 22971525 End: 22975045 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 206 | 589 | 0 |
| VGTRGDVQPFVAIAKRLQDYGHRVRLATHANFKDFVLTAGLEFYPLGGDPKVLAEYMVKNKGFLPSGPSEIPVQRNQMKDIINSLLPACKEPDPDSGISF KADAIIANPPAYGHTHVAEALRIPIHVFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGTQSSGSNIPYG YMWSPHLVPKPKDWGPQIDVVGFCFLDLASNYEPPAELVEWLEAGDKPIYIGFGSLPVQEPETMTEIIVEALQRTKQRGIINKGWGGLGNCRVHHGGAGT TAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPSPIPVDEFSLHKLEDAINFMLDDKVKSSAETLAKAMKDEDGVAGAVKAFF | |||
| Full Sequence |
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| Protein Sequence Length: 620 Download |
| MPPETSPAKL GRASSSSSSS SSSSSDRASV KIEEIEDGGS CSGVVVVNGS EVVETKLESA 60 VTDDNAVAES SGGGSKSFAR VWTMPVEGSS SSDKAESSSS ASKPRLDKSK TERQQQKEKV 120 THILAEDAAK IFDDRLSAGK KLKLLNRIAT VKHDGTVEFE VPADVIPQPI AVDREEDSKN 180 GVCPDESIDG VDLQYIPPMQ IVMLIVGTRG DVQPFVAIAK RLQDYGHRVR LATHANFKDF 240 VLTAGLEFYP LGGDPKVLAE YMVKNKGFLP SGPSEIPVQR NQMKDIINSL LPACKEPDPD 300 SGISFKADAI IANPPAYGHT HVAEALRIPI HVFFTMPWTP TSEFPHPLSR VKQPAGYRLS 360 YQIVDSLIWL GIRDMINDLR KKKLKLRPVT YLSGTQSSGS NIPYGYMWSP HLVPKPKDWG 420 PQIDVVGFCF LDLASNYEPP AELVEWLEAG DKPIYIGFGS LPVQEPETMT EIIVEALQRT 480 KQRGIINKGW GGLGNCRVHH GGAGTTAAGL KAACPTTIVP FFGDQPFWGE RVHARGVGPS 540 PIPVDEFSLH KLEDAINFML DDKVKSSAET LAKAMKDEDG VAGAVKAFFK HLPSMRQNVS 600 DPIPEPSSFL SFRRCFGCS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 2.0e-29 | 198 | 591 | 429 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 1.0e-36 | 201 | 345 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 8.0e-112 | 199 | 591 | 420 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL09737.1 | 0 | 84 | 619 | 1 | 555 | AT3g07020/F17A9_17 [Arabidopsis thaliana] |
| DDBJ | BAH56996.1 | 0 | 3 | 516 | 2 | 534 | AT3G07020 [Arabidopsis thaliana] |
| EMBL | CAB06082.1 | 0 | 3 | 619 | 2 | 637 | UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_566297.2 | 0 | 3 | 619 | 2 | 637 | UDP-glucose:sterol glucosyltransferase (UGT80A2) [Arabidopsis thaliana] |
| RefSeq | NP_850529.1 | 0 | 3 | 619 | 2 | 637 | UDP-glucose:sterol glucosyltransferase (UGT80A2) [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 8e-24 | 199 | 599 | 1 | 388 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3h4i_A | 8e-24 | 199 | 599 | 1 | 388 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 3e-16 | 199 | 572 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 3e-16 | 199 | 572 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1pnv_B | 0.000000000000008 | 199 | 589 | 1 | 384 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO883166 | 335 | 160 | 494 | 0 |
| DY295142 | 361 | 105 | 465 | 0 |
| GT046352 | 288 | 208 | 495 | 0 |
| GT046352 | 29 | 514 | 542 | 0.002 |
| DY295142 | 43 | 452 | 494 | 3.4 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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