PlantCAZyme

CAZyme Information

Basic Information
Species	Brassica rapa
Cazyme ID	Bra029728
Family	GT75
Protein Properties	Length: 379 Molecular Weight: 43198.7 Isoelectric Point: 5.276
Chromosome	Chromosome/Scaffold: 05 Start: 22492670 End: 22494034
Description	reversibly glycosylated polypeptide 3
View CDS

External Links
NCBI Taxonomy
CAZyDB

External Links

NCBI Taxonomy

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GT75	14	360	0
LKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSRTIHIPKGFDYELYNRNDINRILGPKSSCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAE DPSGKGINALEQHIKNLLSPSTPHFFNTLYDPYGDGADFVRGYPFSMREGAITAVSHGLWLNIPDYDAPTQLVKPLERNSRKVYLSTQLPILYVDAVMTI PKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHMGWGVKTGLPYIWHSKASNPFVNLRKEYNGIFWQEEAIPFFQSVTLP KECDSVQQCYMELAKLVKEKLGKVDPYFIKLADGMVTWIEAWDELNA

Full Sequence
Protein Sequence Length: 379 Download
MSQLYSSMKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSRTIHIPKG 60 FDYELYNRND INRILGPKSS CISFKDSACR CFGYMVSKKK YIYTIDDDCF VAEDPSGKGI 120 NALEQHIKNL LSPSTPHFFN TLYDPYGDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD 180 APTQLVKPLE RNSRKVYLST QLPILYVDAV MTIPKGTLFP MCGMNLAFDR ELIGPAMYFG 240 LMGDGQPIGR YDDMWAGWCV KVICDHMGWG VKTGLPYIWH SKASNPFVNL RKEYNGIFWQ 300 EEAIPFFQSV TLPKECDSVQ QCYMELAKLV KEKLGKVDPY FIKLADGMVT WIEAWDELNA 360 PKGTETNAPN AKDEKVTE* 420

Full Sequence

Protein Sequence Length: 379 Download

MSQLYSSMKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSRTIHIPKG    60
FDYELYNRND INRILGPKSS CISFKDSACR CFGYMVSKKK YIYTIDDDCF VAEDPSGKGI    120
NALEQHIKNL LSPSTPHFFN TLYDPYGDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD    180
APTQLVKPLE RNSRKVYLST QLPILYVDAV MTIPKGTLFP MCGMNLAFDR ELIGPAMYFG    240
LMGDGQPIGR YDDMWAGWCV KVICDHMGWG VKTGLPYIWH SKASNPFVNL RKEYNGIFWQ    300
EEAIPFFQSV TLPKECDSVQ QCYMELAKLV KEKLGKVDPY FIKLADGMVT WIEAWDELNA    360
PKGTETNAPN AKDEKVTE*                                                 420

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN03180	PLN03180	0	6	362	357	+ reversibly glycosylated polypeptide; Provisional
pfam03214	RGP	0	14	362	354	+ Reversibly glycosylated polypeptide.

Gene Ontology
GO Term	Description
GO:0005618	cell wall
GO:0007047	: GO:0044234
GO:0008466	glycogenin glucosyltransferase activity
GO:0016758	transferase activity, transferring hexosyl groups
GO:0030054	cell junction

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	AAF07834.1	0	1	373	1	373	AC010871_10 putative reversibly glycosylatable polypeptide [Arabidopsis thaliana]
GenBank	ABK21236.1	0	10	371	6	357	unknown [Picea sitchensis]
RefSeq	NP_187502.2	0	1	373	1	362	RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups [Arabidopsis thaliana]
RefSeq	XP_002311350.1	0	6	371	4	358	predicted protein [Populus trichocarpa]
RefSeq	XP_002512057.1	0	6	371	5	360	Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]

Hydropathy

EST Download unfiltered results here

Hit	Length	Start	End	EValue
CU575244	370	6	374	0
CU572514	367	6	371	0
HO779006	358	11	368	0
HO810375	371	1	371	0
CX109310	363	6	368	0

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_006_00413.1	Aquca_002_00849.1	Aquca_011_00106.2	Aquca_011_00106.1	Aquca_002_00849.2
	Aquca_058_00152.1	Aquca_002_00849.3	Aquca_002_00849.4
Arabidopsis lyrata	477458	488410	317692	918103	333145
	488506
Arabidopsis thaliana	AT3G02230.1	AT3G08900.1	AT5G15650.1	AT5G50750.1	AT5G16510.2
	AT5G16510.1
Brachypodium distachyon	Bradi1g21990.1	Bradi1g15050.1	Bradi2g50660.1	Bradi5g24850.2
Brassica rapa	Bra001037	Bra021473	Bra039165	Bra008683	Bra001338
	Bra006315	Bra000628	Bra008616	Bra023530.143.331	Bra023530.143.331
	Bra023530.18.141	Bra023530.18.141	Bra023571	Bra006359
Carica papaya	evm.model.supercontig_1095.2	evm.model.supercontig_1.156	evm.model.supercontig_14.210	evm.model.supercontig_123.13
Capsella rubella	Carubv10014051m	Carubv10015472m	Carubv10001241m	Carubv10027526m	Carubv10002568m
Chlamydomonas reinhardtii	Cre13.g565800.t1.2
Citrus clementina	Ciclev10020723m	Ciclev10031914m	Ciclev10011996m	Ciclev10033661m	Ciclev10013540m
Citrus sinensis	orange1.1g018080m	orange1.1g017862m	orange1.1g024882m	orange1.1g025304m	orange1.1g045145m
	orange1.1g048449m	orange1.1g039651m	orange1.1g038078m
Cucumis sativus	Cucsa.113400.1	Cucsa.327910.1	Cucsa.198650.1	Cucsa.174470.1	Cucsa.285070.2
	Cucsa.285070.1
Eucalyptus grandis	Eucgr.K02544.2	Eucgr.K02544.1	Eucgr.I02055.1	Eucgr.B00630.1	Eucgr.B01380.1
Fragaria vesca	mrna26116.1-v1.0-hybrid	mrna06291.1-v1.0-hybrid	mrna04238.1-v1.0-hybrid	mrna16775.1-v1.0-hybrid
Glycine max	Glyma02g13330.1	Glyma01g07930.1	Glyma06g22440.1	Glyma13g06690.1	Glyma04g32080.1
	Glyma19g04240.1	Glyma18g50780.1	Glyma08g27590.1	Glyma08g27590.2	Glyma04g32080.2
	Glyma18g47520.3	Glyma18g47520.2	Glyma09g38800.5	Glyma09g38800.4
Gossypium raimondii	Gorai.001G076300.1	Gorai.001G196500.1	Gorai.008G200200.1	Gorai.007G039800.2	Gorai.001G090200.1
	Gorai.007G039800.1	Gorai.007G176700.1	Gorai.001G208000.1	Gorai.013G095500.1	Gorai.008G200200.2
	Gorai.008G200200.3	Gorai.007G039800.3	Gorai.013G095500.3	Gorai.001G196500.2	Gorai.013G095500.2
	Gorai.004G260800.1	Gorai.013G180500.3	Gorai.013G180500.2	Gorai.013G180500.1	Gorai.013G095500.4
	Gorai.007G039800.5	Gorai.007G039800.4	Gorai.008G200200.4
Linum usitatissimum	Lus10000646	Lus10036970	Lus10005076	Lus10017868	Lus10026676
	Lus10004640	Lus10022443	Lus10034376	Lus10016749	Lus10034665
	Lus10009555	Lus10020379	Lus10034664	Lus10033057
Malus domestica	MDP0000232047	MDP0000174584	MDP0000394728	MDP0000286141	MDP0000291731
	MDP0000778464	MDP0000146639.162.400	MDP0000146639.162.400	MDP0000631513	MDP0000265452
	MDP0000156652	MDP0000461829	MDP0000156837	MDP0000204345	MDP0000236647
	MDP0000844514	MDP0000146639.13.109	MDP0000146639.13.109	MDP0000811808	MDP0000595769
	MDP0000532585	MDP0000512932	MDP0000133673
Manihot esculenta	cassava4.1_010056m	cassava4.1_010414m	cassava4.1_010408m	cassava4.1_010334m	cassava4.1_010183m
	cassava4.1_010136m	cassava4.1_026327m	cassava4.1_024143m	cassava4.1_010799m
Medicago truncatula	Medtr5g046030.1	Medtr7g079490.2	Medtr7g079490.1
Mimulus guttatus	mgv1a008980m	mgv1a008906m	mgv1a008625m	mgv1a009275m	mgv1a009196m
	mgv11b024632m
Oryza sativa	LOC_Os03g40270.1	LOC_Os07g41360.1	LOC_Os04g56520.2	LOC_Os04g56520.1
Panicum virgatum	Pavirv00056327m	Pavirv00011249m	Pavirv00032019m	Pavirv00056328m	Pavirv00013211m
	Pavirv00003673m	Pavirv00029652m	Pavirv00021282m
Physcomitrella patens	Pp1s66_154V6.1	Pp1s131_34V6.1	Pp1s131_32V6.1	Pp1s66_157V6.2	Pp1s66_157V6.1
	Pp1s66_155V6.2	Pp1s66_155V6.1	Pp1s131_30V6.1	Pp1s180_12V6.1
Phaseolus vulgaris	Phvul.003G040000.1	Phvul.008G028900.1	Phvul.004G041600.1	Phvul.009G203300.1	Phvul.008G056100.2
	Phvul.008G056100.1
Picea abies	MA_162652g0010	MA_6359g0010.86.328	MA_6359g0010.86.328	MA_514703g0010	MA_148285g0010
	MA_147184g0010	MA_18309g0010.83.291	MA_18309g0010.83.291	MA_69216g0010	MA_10315336g0010
	MA_7564826g0010	MA_467383g0010	MA_10361993g0010	MA_10435046g0010
Populus trichocarpa	Potri.010G156700.1	Potri.008G097600.1	Potri.004G117800.1	Potri.015G060300.1	Potri.017G099100.1
	Potri.012G101100.1	Potri.015G099300.1	Potri.019G051700.1	Potri.T057400.1
Prunus persica	ppa007588m	ppa007760m	ppa007756m	ppa017775m	ppa007906m
	ppa007905m	ppa022800m.145.383	ppa022800m.145.383	ppa022800m.145.383	ppa022800m.14.111
	ppa022800m.14.111	ppa022800m.14.111	ppa022800m.384.458	ppa022800m.384.458	ppa022800m.384.458
Ricinus communis	30138.m003944	30174.m009085	30147.m014473	29790.m000807	30128.m009012
Setaria italica	Si036300m	Si030277m	Si037048m	Si024494m
Selaginella moellendorffii	140071	76446	96340	437552
Sorghum bicolor	Sb02g038770.1	Sb01g015090.1	Sb03g035320.1	Sb06g031590.1
Thellungiella halophila	Thhalv10021014m	Thhalv10013907m	Thhalv10022220m	Thhalv10013945m	Thhalv10019616m
	Thhalv10013999m
Vitis vinifera	GSVIVT01008552001	GSVIVT01008133001	GSVIVT01012244001	GSVIVT01036557001	GSVIVT01019151001
Volvox carteri	Vocar20009212m	Vocar20013853m	Vocar20014914m

Orthologous Group

Species

Aquilegia coerulea

Arabidopsis lyrata