y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra029755 |
Family | GH1 |
Protein Properties | Length: 491 Molecular Weight: 56145.8 Isoelectric Point: 7.0587 |
Chromosome | Chromosome/Scaffold: 05 Start: 22391752 End: 22395195 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 37 | 477 | 0 |
RASFPEGFLFGTATAAYQVEGAVNETCRGPALWDIYCKRYPEKCKNDNGDVAVDFFHRYKEDIQLMKNLNTDAFRLSIAWTRIFPHGRKEKGVSQAGVKF YHDVIDELLRNGIVPFVTVFHWDTPQDLEDEYGGFLSERIVKDFREYADFVFQEYGDKVKHWITFNEPWVFAHAGQKPLKLSQCEKCKGGKVGIAHSPAW FEPHDFQDSQDGASIGRALDFMLGWHLDTTMYGDYPQIMKDIVGHRLPQFTAAQKAKLKNSAHFVGLNYYTSTFANHVENPDHSKPRWKQDSLISWEPKN ADKFTIGSTPSTGKLPVYARGFRSLLKYIKDKYANPEIMIMENGYGEDLGETDSVAVGIADHNRKYYLQRHLLSMNEALSMNEAICIDKVNVTGYFIWSL LDNFEWNEGYKSRFGLYYIDFKNNLTRIEKESGKYYRDFLS |
Full Sequence |
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Protein Sequence Length: 491 Download |
MALQKFPLMG LLMLLTIVVS TATADGPVCP PSTKLSRASF PEGFLFGTAT AAYQVEGAVN 60 ETCRGPALWD IYCKRYPEKC KNDNGDVAVD FFHRYKEDIQ LMKNLNTDAF RLSIAWTRIF 120 PHGRKEKGVS QAGVKFYHDV IDELLRNGIV PFVTVFHWDT PQDLEDEYGG FLSERIVKDF 180 REYADFVFQE YGDKVKHWIT FNEPWVFAHA GQKPLKLSQC EKCKGGKVGI AHSPAWFEPH 240 DFQDSQDGAS IGRALDFMLG WHLDTTMYGD YPQIMKDIVG HRLPQFTAAQ KAKLKNSAHF 300 VGLNYYTSTF ANHVENPDHS KPRWKQDSLI SWEPKNADKF TIGSTPSTGK LPVYARGFRS 360 LLKYIKDKYA NPEIMIMENG YGEDLGETDS VAVGIADHNR KYYLQRHLLS MNEALSMNEA 420 ICIDKVNVTG YFIWSLLDNF EWNEGYKSRF GLYYIDFKNN LTRIEKESGK YYRDFLSQGV 480 RPSTIKRDEL * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 2.0e-88 | 11 | 477 | 512 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-93 | 11 | 476 | 512 | + beta-glucosidase | ||
COG2723 | BglB | 6.0e-118 | 40 | 474 | 468 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-128 | 41 | 472 | 460 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-151 | 36 | 477 | 474 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB38783.1 | 0 | 1 | 490 | 1 | 525 | beta-glucosidase [Arabidopsis thaliana] |
DDBJ | BAH20034.1 | 0 | 1 | 490 | 1 | 524 | AT3G09260 [Arabidopsis thaliana] |
EMBL | CAA61592.1 | 0 | 1 | 490 | 1 | 524 | thioglucoside glucohydrolase [Arabidopsis thaliana] |
RefSeq | NP_176801.1 | 0 | 25 | 490 | 26 | 524 | BGLU21; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_187537.1 | 0 | 1 | 490 | 1 | 524 | PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 33 | 478 | 12 | 490 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 4atl_B | 0 | 32 | 468 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 4atl_A | 0 | 32 | 468 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 4atd_B | 0 | 32 | 468 | 14 | 503 | A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase |
PDB | 4atd_A | 0 | 32 | 468 | 14 | 503 | A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |