| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra029912 |
| Family | CE10 |
| Protein Properties | Length: 324 Molecular Weight: 35671.5 Isoelectric Point: 6.1876 |
| Chromosome | Chromosome/Scaffold: 01 Start: 14805687 End: 14806658 |
| Description | carboxyesterase 13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 33 | 320 | 0 |
| SLTPHNGVVSKDVVYSPGESLSVRVFLPEKAAKTGEKLPLLVYFHGGAFIIETPFSPTYHTFLTTAVSASDCIAVSVDYRRPPEHPIPIPYEDSWTSLKW VFNHIAGCGPENWLNKHADFSKVFVAGDSAGANITHHMTMRAAKEKLSPHLSGSGISGIILVHPYFWSKTPVDDKDTTDVTTRSRSETLWKIASPSSKDG VDDPFINVVQAESVDISGLGCGKVLVMVAELDLLVRQDWCYAAKIERSGWKGEVEVMETEGEKHVFHLKNPDSEKAHELVKKFASFIK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 324 Download |
| MDSEIAYDFS PAFIIYKSGR IERLTGEAIV QSSLTPHNGV VSKDVVYSPG ESLSVRVFLP 60 EKAAKTGEKL PLLVYFHGGA FIIETPFSPT YHTFLTTAVS ASDCIAVSVD YRRPPEHPIP 120 IPYEDSWTSL KWVFNHIAGC GPENWLNKHA DFSKVFVAGD SAGANITHHM TMRAAKEKLS 180 PHLSGSGISG IILVHPYFWS KTPVDDKDTT DVTTRSRSET LWKIASPSSK DGVDDPFINV 240 VQAESVDISG LGCGKVLVMV AELDLLVRQD WCYAAKIERS GWKGEVEVME TEGEKHVFHL 300 KNPDSEKAHE LVKKFASFIK GDM* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00135 | COesterase | 5.0e-7 | 57 | 185 | 146 | + Carboxylesterase family. | ||
| cd00312 | Esterase_lipase | 1.0e-7 | 53 | 179 | 136 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
| COG2272 | PnbA | 2.0e-9 | 53 | 167 | 131 | + Carboxylesterase type B [Lipid metabolism] | ||
| COG0657 | Aes | 3.0e-27 | 11 | 320 | 313 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 3.0e-58 | 73 | 300 | 231 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL57633.1 | 0 | 1 | 321 | 1 | 322 | AT3g48690/T8P19_200 [Arabidopsis thaliana] |
| DDBJ | BAE98942.1 | 0 | 1 | 321 | 1 | 322 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_178453.1 | 0 | 1 | 320 | 1 | 311 | hydrolase [Arabidopsis thaliana] |
| RefSeq | NP_190438.1 | 0 | 1 | 321 | 1 | 322 | CXE12; carboxylesterase [Arabidopsis thaliana] |
| RefSeq | NP_190439.1 | 0 | 1 | 322 | 1 | 328 | ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13); hydrolase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 5e-35 | 8 | 322 | 33 | 351 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
| PDB | 2zsh_A | 5e-35 | 8 | 322 | 33 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 6e-32 | 19 | 323 | 38 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 6e-32 | 19 | 323 | 38 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 6e-32 | 19 | 323 | 38 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DK467924 | 285 | 1 | 285 | 0 |
| DK497046 | 252 | 1 | 252 | 0 |
| EX019947 | 281 | 1 | 281 | 0 |
| EX109246 | 276 | 1 | 276 | 0 |
| DK556623 | 226 | 99 | 324 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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