y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra029933 |
Family | AA2 |
Protein Properties | Length: 350 Molecular Weight: 38485.9 Isoelectric Point: 7.9408 |
Chromosome | Chromosome/Scaffold: 01 Start: 15013995 End: 15016530 |
Description | peroxidase CB |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 39 | 312 | 0 |
NVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLA GGPSWRVPLGRRDSLQAFLNLANANLPAPFFTLPQLKASFRKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPRT GNLSALVDFDVRTPTVFDNKYYVNLREQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGN |
Full Sequence |
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Protein Sequence Length: 350 Download |
MHSTLSTWTI LITLACLMLR ASLSDAQLTP TFYDSSCPNV TNIVRETIVN ELRSDPRIAA 60 SILRLHFHDC FVNGCDASIL LDNTTSFRTE KDAAGNANSA RGFPVIDRMK AAVERACPRT 120 VSCADMLTIA AQQSVTLAGG PSWRVPLGRR DSLQAFLNLA NANLPAPFFT LPQLKASFRK 180 VGLDRPSDLV ALSGGHTFGK NQCRFIMDRL YNFSNTGLPD PTLNTTYLQT LRGLCPRTGN 240 LSALVDFDVR TPTVFDNKYY VNLREQKGLI QSDQELFSSP NATDTIPLVR AYADGTQTFF 300 NAFVEAMNRM GNITPLTGTQ GQIRLNCRVV NSNFLLHDIV DIVDFVSSM* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 3.0e-30 | 44 | 312 | 299 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 7.0e-56 | 44 | 197 | 154 | + Peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-70 | 32 | 331 | 305 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 4.0e-158 | 27 | 330 | 304 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA33377.1 | 0 | 3 | 349 | 7 | 353 | HRPC1 [Armoracia rusticana] |
EMBL | CAA50677.1 | 0 | 8 | 349 | 12 | 353 | peroxidase [Arabidopsis thaliana] |
RefSeq | NP_190480.1 | 0 | 8 | 349 | 13 | 354 | PRXCA (PEROXIDASE CA); peroxidase [Arabidopsis thaliana] |
RefSeq | NP_190481.1 | 0 | 8 | 349 | 12 | 353 | PRXCB (PEROXIDASE CB); peroxidase [Arabidopsis thaliana] |
Swiss-Prot | P00433 | 0 | 3 | 349 | 7 | 353 | PER1A_ARMRU RecName: Full=Peroxidase C1A; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1w4y_A | 0 | 27 | 349 | 1 | 323 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 1w4w_A | 0 | 27 | 349 | 1 | 323 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
PDB | 2atj_B | 0 | 27 | 333 | 2 | 308 | A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid |
PDB | 2atj_A | 0 | 27 | 333 | 2 | 308 | A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid |
PDB | 7atj_A | 0 | 27 | 333 | 1 | 307 | A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |