| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra030029 |
| Family | GH63 |
| Protein Properties | Length: 791 Molecular Weight: 90702 Isoelectric Point: 6.0226 |
| Chromosome | Chromosome/Scaffold: 07 Start: 7057493 End: 7062182 |
| Description | Six-hairpin glycosidases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH63 | 532 | 785 | 1.1e-27 |
| PTEDERHVDLRCWMYLAADCMNSIIEFLGEKGRPVTVDYSSTVKLLSDFNLLNQMHYDHDLGAYLDFGNHTEDVRLVWKEVTGEDGRVSRELVRETFGKP ELRLVPHIGYVSFFPFMFRIIPPTSSILEKHLDLISNRSIVWSDYGLLSLGKTSSLYMKYNTEHEAPYWRGAIWMNMNYMILSSLHHYSIVDGPYMDKAR TIYEELRSNLIRNVVRNYDETGYIWEHYDQTKGTGEGGRVFTGWSALILLIMSE | |||
| Full Sequence |
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| Protein Sequence Length: 791 Download |
| MMMTGASHKI APDEFHHIPR VITPFPAPKL SHLPMFQGDH KESLYWGTYR PQVYFGVRAR 60 TPQSLVAGLM WLGDEKDDDG KHVMRHFCEN SQNLKSFGWR EHNGIDFGRQ ELLDQDMILE 120 TSFVKSKEGS LGYGGDWSVR INLINKGLND EVKRTVHLFF YLADEGGNVL NLGKNVLDLK 180 ESSLLASGSR ADVRKWQMHL KSEAHVETHY CGFKTPDIVN LSHAVQKNLA VQENKSGRLQ 240 LSDTSEDSSS IYVFQISTTT QSTIDIAFVS GIRGESSDVE QRIMSLTGSP LSGLLEEKHI 300 AFDAKFKECF HLSEKLDSET LMVGKAAIGN MLGGIGYFYG QSKIQAPKIT QAKSEVEFLL 360 YWPAELYTAV PSRPVFPRGF LWDEGFHQLL VWRWDFRITL EILGNWLDLM NIDGWIPREQ 420 ILGDEALSKI PKQYVVQIPS NGNPPTLLLV IRDLINGIRA EKFNKEERDE ILSFLDLAFV 480 RLDAWFQWFN TSQKGKEMGS YYWHGRDSLT NRELNPQSLS SGFDDYPRAS HPTEDERHVD 540 LRCWMYLAAD CMNSIIEFLG EKGRPVTVDY SSTVKLLSDF NLLNQMHYDH DLGAYLDFGN 600 HTEDVRLVWK EVTGEDGRVS RELVRETFGK PELRLVPHIG YVSFFPFMFR IIPPTSSILE 660 KHLDLISNRS IVWSDYGLLS LGKTSSLYMK YNTEHEAPYW RGAIWMNMNY MILSSLHHYS 720 IVDGPYMDKA RTIYEELRSN LIRNVVRNYD ETGYIWEHYD QTKGTGEGGR VFTGWSALIL 780 LIMSEEYPLF * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03200 | Glyco_hydro_63 | 0 | 17 | 787 | 794 | + Mannosyl oligosaccharide glucosidase. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63. They catalyze the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase EC:3.2.1.106 is the first enzyme in the N-linked oligosaccharide processing pathway. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004573 | mannosyl-oligosaccharide glucosidase activity |
| GO:0009311 | oligosaccharide metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL17718.1 | 0 | 19 | 790 | 84 | 852 | alpha-glucosidase I [Arabidopsis thaliana] |
| DDBJ | BAC43508.1 | 0 | 19 | 790 | 84 | 852 | putative alpha-glucosidase I [Arabidopsis thaliana] |
| EMBL | CAC34725.1 | 0 | 19 | 790 | 84 | 852 | alpha-glucosidase 1 [Arabidopsis thaliana] |
| RefSeq | NP_173842.2 | 0 | 3 | 790 | 1 | 789 | alpha-glucosidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_176916.2 | 0 | 19 | 790 | 84 | 852 | GCS1 (GLUCOSIDASE 1); alpha-glucosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4j5t_A | 0 | 36 | 783 | 7 | 800 | A Chain A, Crystal Structure Of Processing Alpha-glucosidase I |
| PDB | 2z07_B | 0.006 | 699 | 784 | 349 | 419 | A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Hb8 |
| PDB | 2z07_A | 0.006 | 699 | 784 | 349 | 419 | A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Hb8 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX138135 | 289 | 432 | 720 | 0 |
| HO796961 | 345 | 443 | 787 | 0 |
| FD560611 | 235 | 483 | 717 | 0 |
| FD560611 | 24 | 729 | 752 | 0.67 |
| FD560611 | 12 | 718 | 729 | 0.67 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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