CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra030384
FamilyGT4
Protein PropertiesLength: 672 Molecular Weight: 74658.9 Isoelectric Point: 10.6965
ChromosomeChromosome/Scaffold: 05 Start: 10753193 End: 10755586
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT45096412.8e-22
  RQKQELKLLLGSVGSKSNKVEYVKEMLSFLSSNGNLSKSVIWTPATTRVASLYSAADVYVTNSQGVGETFGRVTIEAMAYGLAVVGTDAGGTKEIVEHNV
  TGLLHPMGRLGNKDLAHSLLFLLRNKDARLQMG
Full Sequence
Protein Sequence     Length: 672     Download
MEEVRLSPLR QISVKSSLSG RSTPRGSPRV HSSGRTPRRG GGGGGGGAVQ WFRSSRLVYW    60
LLLITLWTYL GFYVQSGWAH DNENKVEFLR FGGKLRKDVV HVDVAKSKGM GSVANDTSDA    120
LVSVTTGKDD AGVNKRTDVS LSKKDDVASR RSLSSRRKTR KASRTSRGKQ KVTKAVESKA    180
LEDEQDPQLP MTNATYGNLL GPFGSLEDKV LEWSPHRRSG TCDRKSDFKR LVWSRRFVLV    240
FHELSMTGAP ISMMELASEL LSCGATVSAV VLSRRGGLMQ ELTRRRIKVV EDKGELSFKT    300
AMKADLIIAG SAVCTSWIDQ YMNHHPAGGS QIAWWIMENR REYFDRAKPV LDRVKMLIFL    360
SESQSKQWLT WCEEEHIRVR SQPVIVPLSV NDELAFVAGI PSSLNTPTLS PEKMREKRQT    420
LRESVRTELG LTDADMLVMS LSSINPGKGQ LLLLESVTLA LSEREQEAQR NHKGTVRKEK    480
VNPSKKHRLR GSSRQVQSVP LTLGNAAGRQ KQELKLLLGS VGSKSNKVEY VKEMLSFLSS    540
NGNLSKSVIW TPATTRVASL YSAADVYVTN SQGVGETFGR VTIEAMAYGL AVVGTDAGGT    600
KEIVEHNVTG LLHPMGRLGN KDLAHSLLFL LRNKDARLQM GIQGRKKVEK MYMKQHMYKR    660
FVDVLVKCMR P* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03825GT1_wcfI_like5.0e-1955565298+
TIGR00009L285.0e-19548670125+
TIGR00072hydrog_prot1.0e-20532663133+
cd03808GT1_cap1E_like2.0e-24543663121+
cd03801GT1_YqgM_like6.0e-26543665125+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_175651.1016711670glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqNP_188215.1016711697glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002284822.1016701689PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002298139.101667029679predicted protein [Populus trichocarpa]
RefSeqXP_002528176.10467015684glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3mbo_H0.0000005538670279407A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_G0.0000005538670279407A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_F0.0000005538670279407A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_E0.0000005538670279407A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_D0.0000005538670279407A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
Transmembrane Domains
StartEnd
5779
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FD9875462372144500
EX0733272684056720
EX0745482574166720
EX0755152574166720
EX0764022534206720
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00577.1Aquca_001_00590.2Aquca_001_00590.1
Arabidopsis lyrata889408316473897892474368
Arabidopsis thalianaAT1G19710.1AT1G75420.1AT3G15940.2AT3G15940.1AT1G52420.1
Brachypodium distachyonBradi2g09620.1
Brassica rapaBra025759Bra027200
Carica papayaevm.model.supercontig_99.5evm.model.supercontig_253.2
Capsella rubellaCarubv10020237mCarubv10011399mCarubv10013095m
Citrus clementinaCiclev10025538mCiclev10001031mCiclev10024994m
Citrus sinensisorange1.1g023290morange1.1g017123morange1.1g017085morange1.1g012132morange1.1g011954m
orange1.1g004942morange1.1g004760m
Cucumis sativusCucsa.105340.1Cucsa.300870.1
Eucalyptus grandisEucgr.F01601.1Eucgr.F03009.1Eucgr.J03011.1
Fragaria vescamrna15198.1-v1.0-hybridmrna14930.1-v1.0-hybridmrna05979.1-v1.0-hybrid
Glycine maxGlyma04g03170.1Glyma06g03220.1Glyma15g01640.6Glyma15g01640.5Glyma15g01640.4
Glyma15g01640.3Glyma08g22160.2Glyma07g03870.1Glyma13g43720.1
Gossypium raimondiiGorai.009G198800.1Gorai.003G012600.2Gorai.003G012600.1Gorai.007G199800.4Gorai.007G199800.3
Gorai.007G199800.1Gorai.009G132600.4Gorai.009G132600.3Gorai.009G132600.2Gorai.009G132600.1
Gorai.002G058400.1Gorai.011G077500.1
Linum usitatissimumLus10041786Lus10028338Lus10024281Lus10011469Lus10037523
Malus domesticaMDP0000210114MDP0000312093MDP0000064350MDP0000204168
Manihot esculentacassava4.1_006962mcassava4.1_006727mcassava4.1_002537m
Medicago truncatulaMedtr4g069840.1
Mimulus guttatusmgv1a005641mmgv1a002407m
Oryza sativaLOC_Os01g15780.1
Panicum virgatumPavirv00028369m
Physcomitrella patensPp1s24_249V6.3
Phaseolus vulgarisPhvul.009G060600.1Phvul.010G151400.1Phvul.005G172300.2Phvul.005G172300.1
Picea abiesMA_159042g1120
Populus trichocarpaPotri.005G118800.1Potri.002G031300.1Potri.001G179000.1Potri.001G179000.5
Prunus persicappa005334mppa005118mppa002059m
Ricinus communis30170.m01409429872.m00052635599.m00001450675.m000024
Setaria italicaSi002128m
Selaginella moellendorffii10326098243
Sorghum bicolorSb03g010200.1
Thellungiella halophilaThhalv10007567mThhalv10007509mThhalv10018489mThhalv10020188mThhalv10011288m
Thhalv10011286m
Vitis viniferaGSVIVT01009775001GSVIVT01018875001GSVIVT01017132001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)