| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra030651 |
| Family | GT20 |
| Protein Properties | Length: 853 Molecular Weight: 96965.8 Isoelectric Point: 5.5206 |
| Chromosome | Chromosome/Scaffold: 08 Start: 20948607 End: 20951329 |
| Description | trehalose-phosphatase/synthase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 55 | 541 | 0 |
| SSVSSDRMIIVANRLPLKAERRNGSWSFTWDQDALYLQLKDGLPEDMEVLYVGSLSVDVESYEQDDVAQILLDKFKCVPTFLPPDLQSKFYDGFCKRQLW PLFHYMLPFTADHGTRFDRSLWEAYVATNKLFFQKVIEVINPDDDYVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYRSLPVREEILKALLNS DLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGINMGRIQSVMRYSEEEGKVMELRKRYEGKTVLLGIDDMDIFKGINLKLLA MEQMLNQHSNWRGRAVLVQIVNPARGKGIDIDEIRGEIEGSCKRINESFGKPGYQPIVYIDTPVSVNEIIAYYHIAECVVVTAVRDGMNLTPYEYIVCRQ GLLGSESDFNGPKKSMLVASEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMRDPEKQLRHEKHFRYVSTHDVAFWSRSFLQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 853 Download |
| MISRSYTNLL DLASGNFPVM GREPRRRLPR VMTVPGNVSE FDDDQAYSVS SDNPSSVSSD 60 RMIIVANRLP LKAERRNGSW SFTWDQDALY LQLKDGLPED MEVLYVGSLS VDVESYEQDD 120 VAQILLDKFK CVPTFLPPDL QSKFYDGFCK RQLWPLFHYM LPFTADHGTR FDRSLWEAYV 180 ATNKLFFQKV IEVINPDDDY VWIHDYHLMV LPTFLRRRFN RIRMGFFLHS PFPSSEIYRS 240 LPVREEILKA LLNSDLIGFH TFDYARHFLT CCSRMLGLEY QSKRGYIGLE YYGRTVGIKI 300 MPVGINMGRI QSVMRYSEEE GKVMELRKRY EGKTVLLGID DMDIFKGINL KLLAMEQMLN 360 QHSNWRGRAV LVQIVNPARG KGIDIDEIRG EIEGSCKRIN ESFGKPGYQP IVYIDTPVSV 420 NEIIAYYHIA ECVVVTAVRD GMNLTPYEYI VCRQGLLGSE SDFNGPKKSM LVASEFIGCS 480 PSLSGAIRVN PWNVEATGEA LNEALSMRDP EKQLRHEKHF RYVSTHDVAF WSRSFLQDLE 540 RICVDHFKKR CWGMGISFGF RVVALDPNFR KLSIPCIVSD YKRAKSRAIL LDYDGTLMPQ 600 NSINKAPSQE VLKFLNELCE DKKNSIFIVS GRGRESLGNW FSPCENIGIA AEHGYFLKWP 660 GNKEWETCGQ SCDFGWMQIV EPVMKQYTEA TDGSSIEIKD SALVWQYRDA DSGFGSLQAK 720 EMLEHLESVL ANEPVAVKSG HYIVEVKPQG VSKGSVAEKI FSSMDDKGKP VDFVLCIGDD 780 RSDEDMFEAI GNAMSKRLLC DNALVFACTV GQKPSKAKYY LDDTMEVTSI LESLAEASEA 840 SNFSMRELDE AL* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 4.0e-171 | 61 | 844 | 818 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 839 | 852 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| PRK14501 | PRK14501 | 0 | 61 | 837 | 784 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| pfam00982 | Glyco_transf_20 | 0 | 61 | 541 | 486 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| cd03788 | GT1_TPS | 0 | 61 | 540 | 480 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN67058.1 | 0 | 1 | 847 | 1 | 850 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_172129.1 | 0 | 1 | 852 | 1 | 851 | ATTPS7; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002268174.1 | 0 | 1 | 841 | 1 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305726.1 | 0 | 1 | 841 | 1 | 842 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522255.1 | 0 | 1 | 837 | 1 | 842 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 143 | 543 | 74 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 143 | 543 | 74 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 143 | 543 | 74 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 143 | 543 | 74 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1uqu_B | 0 | 143 | 543 | 75 | 455 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 770 | 80 | 839 | 0 |
| HO779327 | 515 | 100 | 608 | 0 |
| HO779327 | 236 | 604 | 839 | 0 |
| HO795511 | 471 | 373 | 841 | 0 |
| HO777775 | 77 | 1 | 76 | 0.0006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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