| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra030850 |
| Family | AA1 |
| Protein Properties | Length: 550 Molecular Weight: 61833.4 Isoelectric Point: 9.3176 |
| Chromosome | Chromosome/Scaffold: 08 Start: 290441 End: 292927 |
| Description | SKU5 similar 14 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 32 | 501 | 0 |
| VTYGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVVNVFNNLDEPFLLTWSGIQHRKNCWQDGVAGTSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLH RFAGGFGGLRVNSRLLIPVPYADPEDDYTVLINDWYTSGHTALKNFLDSGRTLGLPNGVLINGKSGKVGGKNEPLFTMKPGKTYKYRLCNVGFKSTLNFR IQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQEAKDYYMVASTRFLKKELSTVGVIRYAGSNVQASAELPKTPVGWAWSLNQFRSFRWNLTS NAARPNPQGSYHYGKINITRSIKLVNTKSFVDGKVRYGFNGVSHVDTETPLKLAEYFQMAEKVFKYDVIKDEPAAQITALTVQPNVLNITFRTFVEIIFE NHEKSMESFHLDGYSFFAVASEPGRWTPEKRKNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 550 Download |
| MEGRLLTVLV CLVSTVAIVN AGDPYFFYTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS 60 TSNNNVVVNV FNNLDEPFLL TWSGIQHRKN CWQDGVAGTS CPIPAGQNFT YHFQPKDQIG 120 SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLINDWYTSG HTALKNFLDS 180 GRTLGLPNGV LINGKSGKVG GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV 240 EMEGSHVLQN DYDSLDVHVG QCFSVLVTAN QEAKDYYMVA STRFLKKELS TVGVIRYAGS 300 NVQASAELPK TPVGWAWSLN QFRSFRWNLT SNAARPNPQG SYHYGKINIT RSIKLVNTKS 360 FVDGKVRYGF NGVSHVDTET PLKLAEYFQM AEKVFKYDVI KDEPAAQITA LTVQPNVLNI 420 TFRTFVEIIF ENHEKSMESF HLDGYSFFAV ASEPGRWTPE KRKNYNLLDA VSRHTVQVYP 480 KSWSAILLTF DNAGMWNIRS ENLERRYLGQ QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK 540 GLPLPARYT* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 17 | 549 | 533 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 18 | 537 | 521 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 17 | 541 | 525 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 19 | 537 | 522 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 24 | 540 | 529 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10639.1 | 0 | 1 | 549 | 1 | 558 | putative pollen specific protein [Arabidopsis thaliana] |
| EMBL | CAA47176.1 | 0 | 18 | 546 | 20 | 548 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 4 | 543 | 6 | 547 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_187948.1 | 0 | 3 | 549 | 4 | 550 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_564697.1 | 0 | 1 | 549 | 1 | 549 | sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 537 | 6 | 539 | A Chain A, Crystal Structure Of Dph2 From Pyrococcus Horikoshii |
| PDB | 1asq_A | 0 | 28 | 537 | 6 | 539 | A Chain A, Crystal Structure Of Dph2 From Pyrococcus Horikoshii |
| PDB | 1asp_B | 0 | 28 | 537 | 6 | 539 | A Chain A, Crystal Structure Of Dph2 From Pyrococcus Horikoshii |
| PDB | 1asp_A | 0 | 28 | 537 | 6 | 539 | A Chain A, Crystal Structure Of Dph2 From Pyrococcus Horikoshii |
| PDB | 1aso_B | 0 | 28 | 537 | 6 | 539 | A Chain A, Crystal Structure Of Dph2 From Pyrococcus Horikoshii |
