| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra030961 |
| Family | GT14 |
| Protein Properties | Length: 361 Molecular Weight: 40897 Isoelectric Point: 8.7217 |
| Chromosome | Chromosome/Scaffold: 08 Start: 1124224 End: 1134859 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 183 | 259 | 9.2e-32 |
| GSAWMVLSRPFVEYIIWGWDNLPRTLLMYYTNFVSSPEFYFHTIICNVPEFSKTALNHDLHYIAWHRPPRQHPRLLS | |||
| GT14 | 71 | 182 | 1.8e-39 |
| FAYLVSGSKGDLESLWRTLRALYHPRNQYIVHMDLESPFEERLELASRVSNDSMYSKIGNVYMITKANLVSYTGPTMVANTLHACAILLKRSPDWDWFIN LSASDYPLVTQD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MEKSMSHGHK FSSSMGYANM EKKWVFSLLI ASLVCGFLIV TYFNMSLLLS SLRPPIIETS 60 SHSKVDNLPR FAYLVSGSKG DLESLWRTLR ALYHPRNQYI VHMDLESPFE ERLELASRVS 120 NDSMYSKIGN VYMITKANLV SYTGPTMVAN TLHACAILLK RSPDWDWFIN LSASDYPLVT 180 QDGSAWMVLS RPFVEYIIWG WDNLPRTLLM YYTNFVSSPE FYFHTIICNV PEFSKTALNH 240 DLHYIAWHRP PRQHPRLLSL TNMRPMIASG AAFARKFSRN DSALDRIDKE LLMRTNQEGF 300 TPGGWCGGKP ECSVVEDVAR INPGSGAERL KGLVDRLVSE AKSGKSCGNV NLLQWDKGYL 360 * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-63 | 71 | 267 | 250 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 1.0e-96 | 15 | 182 | 191 | + acetylglucosaminyltransferase family protein; Provisional | ||
| PLN03183 | PLN03183 | 9.0e-104 | 183 | 346 | 164 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU20235.1 | 0 | 69 | 347 | 86 | 431 | unknown [Glycine max] |
| EMBL | CAB43880.1 | 0 | 43 | 347 | 29 | 383 | putative protein [Arabidopsis thaliana] |
| EMBL | CBI20295.1 | 0 | 20 | 346 | 1 | 413 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001060977.1 | 0 | 69 | 354 | 101 | 454 | Os08g0143500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285024.1 | 0 | 15 | 346 | 1 | 418 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000003 | 42 | 180 | 56 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000003 | 42 | 180 | 56 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000003 | 42 | 180 | 56 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000003 | 42 | 180 | 56 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000008 | 42 | 180 | 56 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
