| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031256 |
| Family | GH47 |
| Protein Properties | Length: 580 Molecular Weight: 65634.5 Isoelectric Point: 5.426 |
| Chromosome | Chromosome/Scaffold: 05 Start: 16623769 End: 16627481 |
| Description | alpha-mannosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 112 | 544 | 0 |
| AMIHAWSSYEKYAWGQDELQPQTKDGVDSFGGLGATMIDALDTLYIMGLDEQFQKAREWVATSLDFDKDYDASMFETTIRVVGGLLSAYDLSEDKLFLDK AKDIADRLLPAWDTPSGIPYNIINLRHGNAHNPTWAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVISVLNKDFPADGLLPIYISAETANPSHST ITFGAMGDSFYEYLLKVWVFGSKTSSVKHYRDMWEKSMNGLVSLVKKSTPSSFTYICEKSGTSLSDKMDELACFAPGMLALGASGYNDPAEAKKFLTLAE ELAWTCYNFYESTPTKLAGENYFFNSGSDMSVGTSWNILRPETVESLFYLWRLTGNKTYQDWGWNIFEAFEKNSRIESGYVGLKDVNTGVKDNKMQSFFL AETLKYLYLLFSPATVIPLDEWVFNTEAHPLKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 580 Download |
| MARSKAVVSG SHAHGIWKYF NPAYYLRRPR RLALLFFLFL SVSMVLWDRH SLSRDYQLEV 60 SKLNEEVMRL QLLLEDVKSV VAEDVSVNSS TLKDDVQEDP VDAQRMLRVK EAMIHAWSSY 120 EKYAWGQDEL QPQTKDGVDS FGGLGATMID ALDTLYIMGL DEQFQKAREW VATSLDFDKD 180 YDASMFETTI RVVGGLLSAY DLSEDKLFLD KAKDIADRLL PAWDTPSGIP YNIINLRHGN 240 AHNPTWAGGD SILADSGTEQ LEFIALSQRT GDPKYQQKVE KVISVLNKDF PADGLLPIYI 300 SAETANPSHS TITFGAMGDS FYEYLLKVWV FGSKTSSVKH YRDMWEKSMN GLVSLVKKST 360 PSSFTYICEK SGTSLSDKMD ELACFAPGML ALGASGYNDP AEAKKFLTLA EELAWTCYNF 420 YESTPTKLAG ENYFFNSGSD MSVGTSWNIL RPETVESLFY LWRLTGNKTY QDWGWNIFEA 480 FEKNSRIESG YVGLKDVNTG VKDNKMQSFF LAETLKYLYL LFSPATVIPL DEWVFNTEAH 540 PLKIVPWKDQ VSLGQSTAVQ QRKPTIRLRQ RRIGRMTNK* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01532 | Glyco_hydro_47 | 0 | 112 | 544 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 97 | 546 | 460 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK92711.1 | 0 | 1 | 579 | 1 | 572 | putative mannosidase [Arabidopsis thaliana] |
| DDBJ | BAB01459.1 | 0 | 1 | 579 | 1 | 581 | alpha 1,2-mannosidase-like protein [Arabidopsis thaliana] |
| EMBL | CBI18472.1 | 0 | 1 | 575 | 1 | 571 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175570.1 | 0 | 1 | 578 | 1 | 559 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_566675.1 | 0 | 1 | 579 | 1 | 572 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 99 | 545 | 11 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 105 | 544 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 105 | 544 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 105 | 544 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 105 | 544 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
