| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031357 |
| Family | GT31 |
| Protein Properties | Length: 335 Molecular Weight: 37938.1 Isoelectric Point: 6.8328 |
| Chromosome | Chromosome/Scaffold: 05 Start: 15787275 End: 15789122 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 77 | 272 | 0 |
| RRDSLRETWIPQGEKLEKLEKEKGIVVKFMIGHSATPHSILDKEIDSEDAQYKDFFRLDHVEGYYNLSAKTKTFFSSAVATWDAEFYVKIDDDVHVNLGM LGSTLALHRHKPRVYIGCMKSGPVLTKKTAKYREPEFWKFGEEGNRYFRHATGQIYAISKDLATYISNNQPILHKYANEDVTLGSWFIGLEVEHID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 335 Download |
| MQEKSHEKDV TEEVLKIHKA IEALGKSVAM LQKQLSVRHS YQKIVGVSTT NTSTGGNQMS 60 KVFMVIGVNT AFSSRQRRDS LRETWIPQGE KLEKLEKEKG IVVKFMIGHS ATPHSILDKE 120 IDSEDAQYKD FFRLDHVEGY YNLSAKTKTF FSSAVATWDA EFYVKIDDDV HVNLGMLGST 180 LALHRHKPRV YIGCMKSGPV LTKKTAKYRE PEFWKFGEEG NRYFRHATGQ IYAISKDLAT 240 YISNNQPILH KYANEDVTLG SWFIGLEVEH IDDGNFCCST PDCEMKADAG EVCVASFDWT 300 CSGVCKSVNR MWMVHMICGE DDKAVWDVNY DSLR* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03133 | PLN03133 | 0.002 | 64 | 274 | 223 | + beta-1,3-galactosyltransferase; Provisional | ||
| pfam13334 | DUF4094 | 1.0e-5 | 4 | 40 | 37 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
| pfam01762 | Galactosyl_T | 1.0e-47 | 77 | 273 | 203 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03193 | PLN03193 | 2.0e-155 | 4 | 330 | 332 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51626.1 | 0 | 1 | 327 | 70 | 387 | AC012193_8 putative (Avr9) elicitor response protein; 70358-68256 [Arabidopsis thaliana] |
| RefSeq | NP_564154.1 | 0 | 2 | 329 | 66 | 394 | DD46; galactosyltransferase/ transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_974164.2 | 0 | 2 | 327 | 65 | 381 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002302264.1 | 0 | 5 | 330 | 70 | 390 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513842.1 | 0 | 5 | 326 | 67 | 392 | Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO871487 | 321 | 7 | 326 | 0 |
| EV541071 | 227 | 104 | 329 | 0 |
| EX753051 | 223 | 108 | 329 | 0 |
| CK268505 | 271 | 61 | 330 | 0 |
| HS560505 | 256 | 61 | 315 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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