| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031537 |
| Family | GT8 |
| Protein Properties | Length: 602 Molecular Weight: 68862.8 Isoelectric Point: 9.4569 |
| Chromosome | Chromosome/Scaffold: 09 Start: 35925718 End: 35928493 |
| Description | galacturonosyltransferase 6 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 280 | 573 | 0 |
| CLSMRLTSDYFALDPEKRQMPNQENYNDPSLNHYVVFSDNVLASAVVVNSTISSSKDPEKIVFHVVTDSLNYPSISMWFLLNVHSRATIQIQNIDDMDVL PSDFDQLLMKQNSNDPRFISTLNHARFYLPDIFPGLKKVVLFDHDVVVQRDLSRLWSIDMKGKVIGAVETCQEGEEASLHSMSTFINFSDAWVAGKFSPK ACTWGFGMNLVDLEEWRRRKLTSTYVKYFNLGTKRPLWKAGSLPIGWLTFYRQTLPLDKRWHVMGLGRESDIKTVDIEQAAVIHYDGIMKPWLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 602 Download |
| MKQSRRWQRI LLLSLLSISF FAPLILVSNR LQSITPVVSS RRNPFDHSFN YNCFNFVIQE 60 GGVGLKGPRH ILLKDEGFNE SGAVTQSSEN EKTVDFPKTD VSGNDLQYRE EKVIDSQQKT 120 ESSDEKDQFL TVIQLANKTD IKPPLSKFEK SAKAQRDGAT DVKIKEIRDK VIQAKAYLNF 180 APPGSNSQIV KELRTRMRDL ERAVGDVTKD KDLSKGALRK LKPMEAALYK ASRIFTNCPA 240 MATKLRAMNY NTEELAQAQK NQATYLMHLA ARTTPKGQHC LSMRLTSDYF ALDPEKRQMP 300 NQENYNDPSL NHYVVFSDNV LASAVVVNST ISSSKDPEKI VFHVVTDSLN YPSISMWFLL 360 NVHSRATIQI QNIDDMDVLP SDFDQLLMKQ NSNDPRFIST LNHARFYLPD IFPGLKKVVL 420 FDHDVVVQRD LSRLWSIDMK GKVIGAVETC QEGEEASLHS MSTFINFSDA WVAGKFSPKA 480 CTWGFGMNLV DLEEWRRRKL TSTYVKYFNL GTKRPLWKAG SLPIGWLTFY RQTLPLDKRW 540 HVMGLGRESD IKTVDIEQAA VIHYDGIMKP WLDIGIEKYK RYWNRHVPYY HSYLQQCNIQ 600 A* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02769 | PLN02769 | 2.0e-123 | 161 | 599 | 464 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 4.0e-134 | 165 | 599 | 471 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 1.0e-148 | 160 | 599 | 465 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 1 | 601 | 608 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 99 | 599 | 524 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_563771.1 | 0 | 1 | 601 | 1 | 589 | GAUT6 (Galacturonosyltransferase 6); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_850150.1 | 0 | 1 | 600 | 1 | 609 | LGT5 (LOS GLYCOSYLTRANSFERASE 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002282102.1 | 0 | 1 | 600 | 1 | 587 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307628.1 | 0 | 1 | 600 | 1 | 604 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002520989.1 | 0 | 5 | 601 | 10 | 633 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.00003 | 314 | 571 | 3 | 252 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1g9r_A | 0.00003 | 314 | 571 | 3 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.0002 | 314 | 508 | 3 | 180 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
