| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031550 |
| Family | CE16 |
| Protein Properties | Length: 328 Molecular Weight: 36377.4 Isoelectric Point: 4.7624 |
| Chromosome | Chromosome/Scaffold: 09 Start: 35877876 End: 35879570 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 45 | 311 | 6.8e-22 |
| FSNGRLIPDFIASLMGIKDTVPPFLDPHLSDSDILTGVCFASAGSGYDNYTDLATLSLSVDKQADMFRSYMERLSRIVGDEKAAKIVGEALVIVSSGTND FDINLYDTPSPRIKLGVEGYQDFILSVVHNFVQELYDIGCRKIMVLGLPPIGCLPVQMTFARQKQNERRCIDKQNSDSQEYNQKLKKFLTDIQSNLTGSV IFYADIYGTILDMATNPQSYGIKETTRGCCGTGELELSYLCNPLTRTCPDANDYLFWDDIHPTQRAY | |||
| Full Sequence |
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| Protein Sequence Length: 328 Download |
| MFPAILVFGD STIDTGNNNY INTIIRANFP PYGCNFPGHH ATGRFSNGRL IPDFIASLMG 60 IKDTVPPFLD PHLSDSDILT GVCFASAGSG YDNYTDLATL SLSVDKQADM FRSYMERLSR 120 IVGDEKAAKI VGEALVIVSS GTNDFDINLY DTPSPRIKLG VEGYQDFILS VVHNFVQELY 180 DIGCRKIMVL GLPPIGCLPV QMTFARQKQN ERRCIDKQNS DSQEYNQKLK KFLTDIQSNL 240 TGSVIFYADI YGTILDMATN PQSYGIKETT RGCCGTGELE LSYLCNPLTR TCPDANDYLF 300 WDDIHPTQRA YLVVSLSLVD QILHVLQ* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3240 | COG3240 | 4.0e-12 | 7 | 327 | 334 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| cd01847 | Triacylglycerol_lipase_like | 8.0e-17 | 2 | 315 | 320 | + Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions. | ||
| cd01846 | fatty_acyltransferase_like | 3.0e-36 | 5 | 321 | 317 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 2.0e-113 | 2 | 327 | 329 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 5.0e-137 | 3 | 322 | 321 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF82220.1 | 0 | 1 | 326 | 21 | 346 | AC067971_28 Contains similarity to proline-rich protein APG homolog T27E13.4 gi |
| GenBank | AAM63265.1 | 0 | 1 | 326 | 26 | 351 | Contains similarity to proline-rich protein APG [Arabidopsis thaliana] |
| RefSeq | NP_180032.2 | 0 | 1 | 311 | 31 | 342 | carboxylesterase/ hydrolase, acting on ester bonds [Arabidopsis thaliana] |
| RefSeq | NP_180590.1 | 0 | 1 | 311 | 31 | 342 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| RefSeq | NP_563774.1 | 0 | 1 | 326 | 34 | 359 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX753274 | 245 | 84 | 328 | 0 |
| EV568959 | 231 | 98 | 328 | 0 |
| EV568293 | 231 | 98 | 328 | 0 |
| EX908343 | 226 | 105 | 328 | 0 |
| EX774519 | 214 | 115 | 328 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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