| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031637 |
| Family | GT29 |
| Protein Properties | Length: 494 Molecular Weight: 56188.6 Isoelectric Point: 9.1518 |
| Chromosome | Chromosome/Scaffold: 09 Start: 35464808 End: 35467613 |
| Description | MALE GAMETOPHYTE DEFECTIVE 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT29 | 170 | 365 | 1.3999e-42 |
| KCYNRTLCEEHLNVILPAKPPFHPRQFHKCAVVGNSGDLLKTDFGEEIDSHDAVFRDNEAPVNEKYAKYVGVKRDFRLVVRGAARNMVKILNGSDSEVLI IKSVTHRDFNEMIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQLLECLGVIRIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 494 Download |
| MRSHHHQGGR SKLTILQLLC AVAVFSVLLF TIQSSFFSDN ANRKVNILRP EDIQILSEFQ 60 SSVQQCVVCL LSLSTSLIAK GDRGLGLSAH IIDHCNLILK FPQGTNSTWY NAQFKIFEPL 120 EFKYNVCEAV LLWEQYRNMT TVLTREYLDV RPNGWLDYAA MRIAQLGADK CYNRTLCEEH 180 LNVILPAKPP FHPRQFHKCA VVGNSGDLLK TDFGEEIDSH DAVFRDNEAP VNEKYAKYVG 240 VKRDFRLVVR GAARNMVKIL NGSDSEVLII KSVTHRDFNE MIKTIPNPVY LFQGIVLRRG 300 AKGTGMKSIE LALSMCDIVD IYGFTVDPGY TEWTRYFSTP RKGHNPLQGR AYYQLLECLG 360 VIRIHSPMRS ERKEDWSSVP SREMITRAHA SALRLQRSQQ ATSLKKDGLG QFGNCKVWGD 420 ADPRKGPVSG SPDMSEVRKK SDYKKWEVMP FKSLRKEARD HYVQMQGVSQ YKMDGNKLDD 480 LVCVRHRPLE SET* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 3.0e-46 | 156 | 368 | 256 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ15147.2 | 0 | 52 | 493 | 44 | 469 | sialyltransferase-like protein [Solanum lycopersicum] |
| EMBL | CAJ15155.1 | 0 | 52 | 493 | 44 | 469 | sialyltransferase-like protein [Solanum tuberosum] |
| EMBL | CBI21279.1 | 0 | 10 | 492 | 14 | 477 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_850940.1 | 0 | 1 | 493 | 1 | 474 | glycosyl transferase family 29 protein / sialyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002320429.1 | 0 | 12 | 493 | 8 | 474 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.0000000002 | 198 | 349 | 99 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2wnb_A | 0.0000000002 | 198 | 349 | 99 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.0000000002 | 198 | 349 | 99 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
