| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031749 |
| Family | CBM45 |
| Protein Properties | Length: 1363 Molecular Weight: 152841 Isoelectric Point: 5.9651 |
| Chromosome | Chromosome/Scaffold: 09 Start: 34937439 End: 34945757 |
| Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM45 | 119 | 194 | 5e-24 |
| LHWGAIRDNNEKWVLPSRCPDRTINYKNRALRTPFVKSGGNSYLKLEIDDNAIHAIEFLIFDESRNKWYKSNGQNF | |||
| Full Sequence |
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| Protein Sequence Length: 1363 Download |
| MSNSVVHHLL NRGFTRPVSF EHRNKLNSSC VPAVGKIGKS SLGTQLYGKG LQKTGRRLIT 60 ETGRPVSFVT RAVLAMDPAS QTVEKFNLDG NIDLLVEVTS ATVREVNIQI AHTSDSLLLH 120 WGAIRDNNEK WVLPSRCPDR TINYKNRALR TPFVKSGGNS YLKLEIDDNA IHAIEFLIFD 180 ESRNKWYKSN GQNFHINLPT ERNVDHNVSV PEDLVQIQAY LRWERNGKQN YSPEKEKEEY 240 EVARTELREE MMRGASVEDL RAKLLKKDNN TSDSPKSKGT SSSEQESQKK VSKQPKQKQH 300 FSTEKIQRKA RDLNKLICKH VADFVDPKSI SSTEPRALTT LELYAIAKEE QETTPVFSKK 360 TFKLEGSTIL VLVSKLSGKT KIHLATDFKE PITLHWALSQ NGGEWLDPPS DILPPNSLPV 420 RGAVDTQLTI SSTDLPSPVQ TFELEIEGDS YKGMPFVLNV GERWIKNHDS DFYVDFAKEE 480 KHVQKDHGDG KGTAKNLLDK IADLESEAQK SFMHRFNIAA DLVDEAKNAG QLGFAGILVW 540 MRFMATRQLV WNKSYNVKPR EISQAQDRLT GGLQNVYASY PEYRELLRMI MSTVGRGGEG 600 DVGQRIRDEI LVIQSKNNCK GGMMEQWHQK LHNNTSPDDV IICQALMDYI KSDFDMSVYW 660 KTLNDNGITK ERLLSYDRAI RSEPGFSSEQ KDGLLRDLGH YMRTLKAVHS GADLESAIQN 720 CMGYQDDARG FMVGVQINPI SGLPSGYPDL LRFVLEHVEE KNVEPLLEGL LEARQELRPL 780 LLKSHDRLKD LLFLDLALDS TVRTAIERGY EQLNDAGPEK IMYFISLVLE NLALSSDDNE 840 DLIYCLKGWQ FALSMFRSKK DHWALYAKSV LDRSRLALQS KAERYLEILQ PSAEYLGSCL 900 GVEQWAISIF TEEIIRAGSA AALSSLVNRL DPVLRQTANL GSWQVISPVE VVGYVIVVDE 960 LLTVQNKTYD RPTIIVANRV RGEEEIPDGA VAVLTPDMPD VLSHVSVRAR NGKICFATCF 1020 DSGILADLQA MDGKLLSLKP TSADVVYREV NDSELSNLSS DNLEEAPPSI SLVKKQFVGR 1080 YAISSEEFTN DLVGAKSRNI GYLKGKVPSW AVNEKLQVLK KSLDEGDQDA LGEIRKTVLG 1140 LVAPAELVEE LKSTMKKSDM PWPGDEGEQR WEQAWAAIKK VWASKWNERA YFSTKKVKLD 1200 HDYLCMAVLV QEVINADYAF VIHTTNPSSG DSSEIYAEVV KGLGETLVGA YPGRSLSFIT 1260 KKNNLDSPLV LGYPSKPIGL FIRRSIIFRS DSNGEDLEGY AGAGLYDSVP MDEEDKVVLD 1320 YTTDPLITDE SFQQKILSDI ARAGDAIEKL YSCMELHKTL KG* 1380 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0574 | PpsA | 3.0e-8 | 1170 | 1250 | 83 | + Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] | ||
| PRK06241 | PRK06241 | 3.0e-8 | 1091 | 1248 | 213 | + phosphoenolpyruvate synthase; Validated | ||
| TIGR01418 | PEP_synth | 8.0e-11 | 1091 | 1352 | 317 | + phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes [Energy metabolism, Glycolysis/gluconeogenesis]. | ||
| pfam01326 | PPDK_N | 1.0e-21 | 1116 | 1249 | 156 | + Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005524 | ATP binding |
| GO:0016301 | kinase activity |
| GO:0016310 | phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31337.1 | 0 | 1 | 1355 | 1 | 1338 | AC007354_10 Strong similarity to gb |
| GenBank | AAF17665.1 | 0 | 44 | 1355 | 160 | 1520 | AC009398_14 F20B24.19 [Arabidopsis thaliana] |
| RefSeq | NP_563877.1 | 0 | 1 | 1355 | 1 | 1379 | SEX1 (STARCH EXCESS 1); alpha-glucan, water dikinase [Arabidopsis thaliana] |
| RefSeq | XP_002315679.1 | 0 | 1 | 1351 | 1 | 1453 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527902.1 | 0 | 1 | 1355 | 1 | 1449 | alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777523 | 874 | 505 | 1351 | 0 |
| HO794398 | 728 | 651 | 1351 | 0 |
| HO794398 | 142 | 510 | 651 | 0 |
| EX118207 | 304 | 985 | 1263 | 0 |
| FD976522 | 265 | 555 | 819 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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