| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra031787 |
| Family | GT76 |
| Protein Properties | Length: 489 Molecular Weight: 55383.8 Isoelectric Point: 9.4023 |
| Chromosome | Chromosome/Scaffold: 09 Start: 34754060 End: 34756141 |
| Description | transferases, transferring hexosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT76 | 18 | 488 | 0 |
| IKYAVFSRLLVLFLTISWRSFLQPYDTSAALNPPCLHHEEVTEESPPLNAVSKTLENGVVWDSVYFVRISQCGYEYEQTYAFLPLLPFFISLLSRTVFAP LVPLIGLRGVMVLSGYVVSNLAFVFAAIYLFRVSVIVLKDAEASFRASVMFCFNPASIFYSSVYSESLYALFSIGGLYHLLSGASNVAVLWFALSGCARS NGILNAGYICFQTMHRAYEALYLKRRVCVLVTGLLRCICICLPFVAFQAYGYYNICHGHKLEELRPWCKAKVPLLYNFIQSHYWGVGFLRYFRFKQLPNF LLASPILSLAVCSIVSYMKTRHELFISLGFQATEKEKRSSARLYSLKDALEPDVITSSNDNRDIRQRKPRRKDVTVINAAAKSNSPETTGYFSADVFPFV VHLGLMTATAFFIMHVQVATRFLSASPSLYWFASHLIASPRHRKWGYLIWSYCAAYILLGTLLFSNFYPFT | |||
| Full Sequence |
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| Protein Sequence Length: 489 Download |
| MAKAMEPNSK SRKELVLIKY AVFSRLLVLF LTISWRSFLQ PYDTSAALNP PCLHHEEVTE 60 ESPPLNAVSK TLENGVVWDS VYFVRISQCG YEYEQTYAFL PLLPFFISLL SRTVFAPLVP 120 LIGLRGVMVL SGYVVSNLAF VFAAIYLFRV SVIVLKDAEA SFRASVMFCF NPASIFYSSV 180 YSESLYALFS IGGLYHLLSG ASNVAVLWFA LSGCARSNGI LNAGYICFQT MHRAYEALYL 240 KRRVCVLVTG LLRCICICLP FVAFQAYGYY NICHGHKLEE LRPWCKAKVP LLYNFIQSHY 300 WGVGFLRYFR FKQLPNFLLA SPILSLAVCS IVSYMKTRHE LFISLGFQAT EKEKRSSARL 360 YSLKDALEPD VITSSNDNRD IRQRKPRRKD VTVINAAAKS NSPETTGYFS ADVFPFVVHL 420 GLMTATAFFI MHVQVATRFL SASPSLYWFA SHLIASPRHR KWGYLIWSYC AAYILLGTLL 480 FSNFYPFT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5542 | COG5542 | 5.0e-16 | 122 | 324 | 208 | + Predicted integral membrane protein [Function unknown] | ||
| pfam04188 | Mannosyl_trans2 | 1.0e-19 | 416 | 488 | 83 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
| pfam04188 | Mannosyl_trans2 | 3.0e-119 | 11 | 357 | 352 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005789 | endoplasmic reticulum membrane |
| GO:0006506 | GPI anchor biosynthetic process |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17633.1 | 0 | 1 | 488 | 1 | 492 | Contains similarity to hypothetical protein C18b11.05 gb |
| RefSeq | NP_172652.2 | 0 | 1 | 488 | 1 | 489 | transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002283435.1 | 0 | 10 | 488 | 8 | 497 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304011.1 | 0 | 1 | 488 | 1 | 483 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527781.1 | 0 | 8 | 488 | 3 | 500 | conserved hypothetical protein [Ricinus communis] |
