y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra032154 |
Family | AA1 |
Protein Properties | Length: 540 Molecular Weight: 60924.9 Isoelectric Point: 10.0729 |
Chromosome | Chromosome/Scaffold: 04 Start: 10479037 End: 10482278 |
Description | SKU5 similar 16 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 46 | 499 | 0 |
VPQQVILINGQFPGPPIEGVTNDNILVNLINKIDEPLLITWNGIKQRRMSWQDGVLGTSCPIQPNSNWTYHFQLKDQIGTYTYFASTSMHRASGAFGALN VNQRSVIFVPYHKPDGDFTLLVSDWYKMGHKALRKRLDSGRALPLPDGLLINGASKGLAFTGEHGKFYRFRISNVGISTSINFRIQGHMMTLVEVEGSHT LEEVYESLDVHVGQSLTVLVTLKAPVKDYFIVASTRFTKPVLTTSAILHYKGSKTRPSRPLPIGPTYHIHWSMKQARTIRLNLTANAARPNPQGAFHYGT IPISQTLVLANARTKINGKLRYTVNRVSYVNPTTPLKLADWYNIPGVFDFKTIKNIPTPGPSILGTSVLDFALHEYVEFVFQNNERSIQSWHIDGTNAYV VGYGTGTWNVAMRKRYNYVDAVSRHTFQVYPMSWTSVLASLDNKGMWNVRSQIW |
Full Sequence |
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Protein Sequence Length: 540 Download |
MKQGNLLIQV FLLAYCFGSV CVINAEDPYR FFTWTVTYGT RSPLGVPQQV ILINGQFPGP 60 PIEGVTNDNI LVNLINKIDE PLLITWNGIK QRRMSWQDGV LGTSCPIQPN SNWTYHFQLK 120 DQIGTYTYFA STSMHRASGA FGALNVNQRS VIFVPYHKPD GDFTLLVSDW YKMGHKALRK 180 RLDSGRALPL PDGLLINGAS KGLAFTGEHG KFYRFRISNV GISTSINFRI QGHMMTLVEV 240 EGSHTLEEVY ESLDVHVGQS LTVLVTLKAP VKDYFIVAST RFTKPVLTTS AILHYKGSKT 300 RPSRPLPIGP TYHIHWSMKQ ARTIRLNLTA NAARPNPQGA FHYGTIPISQ TLVLANARTK 360 INGKLRYTVN RVSYVNPTTP LKLADWYNIP GVFDFKTIKN IPTPGPSILG TSVLDFALHE 420 YVEFVFQNNE RSIQSWHIDG TNAYVVGYGT GTWNVAMRKR YNYVDAVSRH TFQVYPMSWT 480 SVLASLDNKG MWNVRSQIWS RRYLGQELYV RVWNNERSLY TEAEPPLNAL YCGKAKRPV* 540 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 4 | 535 | 534 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 536 | 545 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 20 | 535 | 516 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 23 | 535 | 517 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 7 | 534 | 550 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 1 | 538 | 65 | 601 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195433.1 | 0 | 1 | 539 | 1 | 541 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_565554.1 | 0 | 1 | 538 | 1 | 538 | sks16 (SKU5 Similar 16); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002310164.1 | 0 | 9 | 538 | 3 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 1 | 538 | 1 | 540 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 537 | 4 | 543 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asq_A | 0 | 30 | 537 | 4 | 543 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_B | 0 | 30 | 537 | 4 | 543 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_A | 0 | 30 | 537 | 4 | 543 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1aso_B | 0 | 30 | 537 | 4 | 543 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |