| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032332 |
| Family | CBM57 |
| Protein Properties | Length: 955 Molecular Weight: 106132 Isoelectric Point: 6.5117 |
| Chromosome | Chromosome/Scaffold: 09 Start: 22469713 End: 22475245 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 359 | 543 | 1e-25 |
| HINCGGGTVQITNSSRRITYQADNNKVLAATNLHMEGWGISNTGDFTDDTSDDDTFIISTSLRISGGSPDIYKTARRSALSLVYYAFCLENGAYNVKLHF MEIQFSDKEVYSRIGRRIFDVYVQGELFLKDFNIKDEANGTLNPVVKELKAVNVTDHMLEIRLYWAGKGTTFIPNRGYYGPLISA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 955 Download |
| MTWIVFSALL FFTIITSLSV IQTTSTSPAL HPDELNALEK IATTLGIKRV NLSHEDPCSS 60 GTLMITQQVD FAWNPEVNNT IACNCSFNNN TTCHITELVL RNFTLEGKLP PDLAKLRYLQ 120 SIDLSANYLT GTIPVEWASM SHLILISLSG NSLSGSLPTW LQNLKNLKFL GLEGNQFSGP 180 IPDEIGNLTN LERLYLSSNQ FTGSLPITLA KLVNLERFWI CDNNFSGTFP AYMGNWSQLK 240 RLYLYASGLK GPIPDAVASL ENLTDLRISD TTGIDSFPIL SSKVIDTLIL RNLNLSGPIP 300 SYIWSLPILK RLDLSFNKLT GEVQDIHKAP KFTYLAGNML TGNFESAFFF NNKPNISLHI 360 NCGGGTVQIT NSSRRITYQA DNNKVLAATN LHMEGWGISN TGDFTDDTSD DDTFIISTSL 420 RISGGSPDIY KTARRSALSL VYYAFCLENG AYNVKLHFME IQFSDKEVYS RIGRRIFDVY 480 VQGELFLKDF NIKDEANGTL NPVVKELKAV NVTDHMLEIR LYWAGKGTTF IPNRGYYGPL 540 ISAISLCHTE KIKHHINYPL VLGATGAFVT TTLLALGIYA WRRRREDKIT RERDLRSESL 600 QTVCYTWKQL KAATNNFDQA NKLGEGGFGA VFKGQLPDGT IIAVKQLSSK SHQGNREFVN 660 EIGMISGLNH PNLVKLYGCC VEKNQLLLVY EYMQNNSLAL VLHEKSSLKL DWVARKKICV 720 GIAKGLEFLH EGSMIRMVHR DIKTSNVLLD ADLNAKISDF GLARLHQEEN THISTKVAGT 780 MGYMAPEYVL WGQLTEKVDV YSFGVVVMEI VSGQSNTKHK GSDDDEVSLI NWALTLQQKG 840 DILEIVDPML EGEFNSKEAA RMINVALVCT NSSPSMRPTM SEAVQMLEGV IEIKEVMPDS 900 GLYGHDWSMS KLMHIDTRGR SSTSGVTDQT ETSMKSSVSG FDLYQYPSSS LECP* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00220 | S_TKc | 4.0e-51 | 621 | 886 | 268 | + Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily. | ||
| pfam07714 | Pkinase_Tyr | 2.0e-51 | 622 | 887 | 292 | + Protein tyrosine kinase. | ||
| pfam11721 | Malectin | 7.0e-53 | 357 | 544 | 191 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| smart00219 | TyrKc | 5.0e-53 | 622 | 887 | 276 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
| smart00221 | STYKc | 3.0e-54 | 622 | 887 | 276 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG10621.1 | 0 | 5 | 951 | 15 | 942 | AC008030_21 Putative receptor-like serine/threonine kinase [Arabidopsis thaliana] |
| GenBank | AAG10622.1 | 0 | 33 | 949 | 65 | 1003 | AC008030_22 Putative receptor-like serine/threonine kinase - partial protein [Arabidopsis thaliana] |
| GenBank | AAG50772.1 | 0 | 33 | 949 | 7 | 906 | AC079288_1 receptor-like serine/threonine kinase (RFK1), putative [Arabidopsis thaliana] |
| GenBank | AAG50775.1 | 0 | 5 | 951 | 15 | 935 | AC079288_4 receptor-like serine/threonine kinase, putative [Arabidopsis thaliana] |
| RefSeq | NP_174266.2 | 0 | 5 | 951 | 15 | 964 | ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ulz_A | 0 | 605 | 889 | 20 | 308 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| PDB | 3uim_A | 0 | 605 | 889 | 20 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
| PDB | 3tl8_H | 0 | 605 | 889 | 28 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_G | 0 | 605 | 889 | 28 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_D | 0 | 605 | 889 | 28 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
