| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032351 |
| Family | GH47 |
| Protein Properties | Length: 618 Molecular Weight: 68386.3 Isoelectric Point: 7.1375 |
| Chromosome | Chromosome/Scaffold: 09 Start: 22343126 End: 22345833 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 129 | 614 | 0 |
| AFDFAWSGYRKYAMGYDELMPISQRGVDGLGGLGATVVDALDTAMIMGHDHIVSEAGAWVEAHLLERISQKDQVNLFETTIRVLGGLLSAYHLSGGDQGT VNMTHIGPKPDVYLNVAKDLADRLLSAFSSSPTPIPYSDVILRDSTAHPAPGGMSSTAEVASVQLEFNYLSAVSGDLKYSAEAMKVLAHIKTLPKTEGLV PIYISPQSGEFVGENIRLGSRGDSYYEYLIKVWLQQGGKLNSNFTYLHDMYTEAMKGVRHLLVRKSIPKGLVFVGELPYGSKGEFSPKMDHLVCFLPGTL ALGATKGLTKEKALAENLLSFEDLENLKLAEELAKACFEMYEVTATGLAPEIAYFHTEEHSEDGLEGGNKSSMYAKDIIIHQADRHNLLRPETVESLFVL YRITKDTKYRDQGWQIFEAFEKYTKVKTGGYTSLDDVTEVPPRRRDKMETFFLGETLKYLYLLFGDDSVIPLDKFVFNTEAHPLPI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 618 Download |
| MSKSLPYSVK DVNYDNAKFR HRSPLKVLSQ SMLTLSTKRN YASCSTGKFL ILILIFGIGC 60 LLLISKGPND SAPNEKGKVT FVGGLRLGKL LRKPPRLPPR LSPDEGQLRA NGSNSDPKWA 120 VRQQSVKDAF DFAWSGYRKY AMGYDELMPI SQRGVDGLGG LGATVVDALD TAMIMGHDHI 180 VSEAGAWVEA HLLERISQKD QVNLFETTIR VLGGLLSAYH LSGGDQGTVN MTHIGPKPDV 240 YLNVAKDLAD RLLSAFSSSP TPIPYSDVIL RDSTAHPAPG GMSSTAEVAS VQLEFNYLSA 300 VSGDLKYSAE AMKVLAHIKT LPKTEGLVPI YISPQSGEFV GENIRLGSRG DSYYEYLIKV 360 WLQQGGKLNS NFTYLHDMYT EAMKGVRHLL VRKSIPKGLV FVGELPYGSK GEFSPKMDHL 420 VCFLPGTLAL GATKGLTKEK ALAENLLSFE DLENLKLAEE LAKACFEMYE VTATGLAPEI 480 AYFHTEEHSE DGLEGGNKSS MYAKDIIIHQ ADRHNLLRPE TVESLFVLYR ITKDTKYRDQ 540 GWQIFEAFEK YTKVKTGGYT SLDDVTEVPP RRRDKMETFF LGETLKYLYL LFGDDSVIPL 600 DKFVFNTEAH PLPIKHT* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 8.0e-163 | 120 | 617 | 503 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 0 | 129 | 614 | 491 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 64 | 615 | 1 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| RefSeq | NP_564345.1 | 0 | 1 | 615 | 1 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 1 | 615 | 1 | 633 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 1 | 615 | 1 | 629 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 1 | 617 | 1 | 622 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 122 | 614 | 10 | 456 | A Chain A, Structure Of A 3-Phosphoshikimate 1-Carboxyvinyltransferase (Aroa) From Coxiella Burnetii |
| PDB | 1fo2_A | 0 | 122 | 614 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 122 | 614 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 122 | 614 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 126 | 614 | 9 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
