| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032357 |
| Family | GH17 |
| Protein Properties | Length: 379 Molecular Weight: 41593.2 Isoelectric Point: 4.9521 |
| Chromosome | Chromosome/Scaffold: 09 Start: 22266122 End: 22267422 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 27 | 343 | 0 |
| LGINYGQVGDNLPPPNKVLQLLSSLNINKTRIYDTNPQVLTSFANSNIELFVTVENEILPSLVDPQKALQWVTSRIKPYFPATKIGGIAVGNELYTDDDS SLIGYLVPAMTSIHAALVQTGLDKYIQVSTPSSLSLLQESYPPSAGCFRPQVAGVMTQLLSFLRSTKSPFWINAYPYFAYKDSPTKIPLDYVLFNPNPGM VDPYTKYHYDNMLYAQVDAVIFAMARLGFKDIEVGVSETGWPSKGDGDEIGATVANAAVYNKNLLKRQLHGEGTPLRPNMSLDVYLFALFNEDLKPGPTS ERNYGLYQPDETMTYNV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 379 Download |
| MTNSIVLLLF FLTFLEHGLF FQRVSSLGIN YGQVGDNLPP PNKVLQLLSS LNINKTRIYD 60 TNPQVLTSFA NSNIELFVTV ENEILPSLVD PQKALQWVTS RIKPYFPATK IGGIAVGNEL 120 YTDDDSSLIG YLVPAMTSIH AALVQTGLDK YIQVSTPSSL SLLQESYPPS AGCFRPQVAG 180 VMTQLLSFLR STKSPFWINA YPYFAYKDSP TKIPLDYVLF NPNPGMVDPY TKYHYDNMLY 240 AQVDAVIFAM ARLGFKDIEV GVSETGWPSK GDGDEIGATV ANAAVYNKNL LKRQLHGEGT 300 PLRPNMSLDV YLFALFNEDL KPGPTSERNY GLYQPDETMT YNVGLLSSSS TSSQSSTSTN 360 SFMSITSSAS TVCTNTGF* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 258 | 336 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-94 | 27 | 343 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52058.1 | 0 | 1 | 351 | 10 | 360 | AC022455_12 beta-1,3-glucanase precursor, putative; 75043-73120 [Arabidopsis thaliana] |
| GenBank | AAM96962.1 | 0 | 1 | 371 | 10 | 380 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
| RefSeq | NP_174300.2 | 0 | 1 | 371 | 10 | 380 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002270153.1 | 0 | 11 | 344 | 12 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332000.1 | 0 | 9 | 374 | 16 | 376 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 343 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 27 | 343 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 27 | 343 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 27 | 343 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 27 | 343 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
