| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032416 |
| Family | GT48 |
| Protein Properties | Length: 2063 Molecular Weight: 238421 Isoelectric Point: 8.6287 |
| Chromosome | Chromosome/Scaffold: 09 Start: 35974639 End: 35985633 |
| Description | glucan synthase-like 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1043 | 1774 | 0 |
| IPQNLEARRRMTFFANSLFMNMPDAPRVRDMLSFSVLTPYYKEDVLYSEEELNKENEDGISILFYLQRIYPEEWSNYVERVIDVKRNFSDKEKTDQLREW VSFRGQTLSRTVRGMMYYRMSLELQCYQEYTGEDDTNDGYLSSASNENFMNRARALADLKFTYVVSCQVYGNQKKSSEGRDRSCYNNILQLMLKYPSLRV AYIDEREETVNNKSQKVFYSVLLKGGNKLDEEIYRIKLPGNPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEESFKMRNVLQEFDEGRRGKRNPT ILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRIFHITRGGISKASKIINLSEDIFAGYNSTLRGGYITHHEYIQAGKGR DVGMNQISIFEAKVANGNGEQTLSRDVYRLGRRFDFYRMLSFYFTTVGFYFSSMITVVTVYVFLYGRLYLVLSGLEKEILQSATIHQSKALEEALAAQTV FQLGFLMVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYFGRTVLHGGSKYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELVILLVV YQVYGNSYRSSSLYLYITFSMWFLVSSWLFAPFIFNPSGFEWQKTVDDWTDWKRWMGNRGGIGIVVEKSWESWRESEQEHLKHTNLGGRVLEILLALRFL LYQYGIVYHLNVAHRDTTLLVYGLSWAVLLSV | |||
| Full Sequence |
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| Protein Sequence Length: 2063 Download |
| MASTSGGRGG EDGRPPQMQP VRSLSRRMTR AGTMMMIEPN EDESIIDSEL VPSSLAAIAP 60 ILRVANDIEE DNPRVAYLCR FHAFEKAHKM DPTSSGRGVR QFKTYLLHKL QEEEPTSDPN 120 EIQTYYQNFY VDNIENGEGK KTPEEMAKLY QMATVLYDVL KTVIHPARID EKTHRYAKEV 180 ERKKDHYEPY NILPLDVGGA KTVIMELPEI KAAIRAVCNV QNLPQPRVPS ASTKPNEVDR 240 EKARTFNDIL EWLALVFGFQ RGNVANQREH LILLLANVDV RKRNLENYED VKPSTVNKLM 300 EKYFKNYKSW CNYLRMESYL RFPAGCDEQQ LSLLYIGLYL LIWGEASNVR FMPECLCYIF 360 HNMANEVHGI LFSNVYPVTG ETYEAGAPDD EAFLRNVITP IYQVLRKEVR RNKMGKASHS 420 KWRNYDDLNE YFWDKRCFRL DWPMKPEADF FIHTDVISQR PNERHDPVSH GKRKPKTNFV 480 EARTFWNLYR TFDRMWMFLA LSLQVMIIVA WSPSGSILNI FSEDVFKNVL TIFITSAFLN 540 LLQATLDVIL SFGAWKSLKF TQILRYITKF LMAAMWAIIL PITYSNSLQN PTGLIKFFSS 600 WIGSWLHQSS YNYAIALYVL PNILAAVFFL LPPLRRIMER SNMRIVTFIM WWAQPKLYVG 660 RGMHEEMFAL FKYTFFWVML LLSKLAFSYY VEILPLVKPT RLIWDMTGVN YQWHEFFPNA 720 THNIGVIISI WGPIVLVYFM DTQIWYAIFS TLFGGISGAF SHLGEIRTLG MLRSRFRFVP 780 SAFCGKLTPL PPGHPKRKHL EETVDERDIA RFSQMWNKFV YTMRDEDLIS DRERDLLLVP 840 SSSKDVTVLQ WPPFLLASKI PIALDMAKDF KGKEDIDLFK KIKSEYYMHY AVVEAYESVR 900 DVIYGLLEDE SDKRIVREIC YEIDVSIQQH KFLSKFRMTG MPLLSDKLEK FLKILLSGDE 960 EDDTYKSQII NVLQDIIEII TQDIMVNGHE ILERAHFQSG DIDTDKKEQR FEKINLYKQD 1020 ASWREKVVRL LLLVTVKESA INIPQNLEAR RRMTFFANSL FMNMPDAPRV RDMLSFSVLT 1080 PYYKEDVLYS EEELNKENED GISILFYLQR IYPEEWSNYV ERVIDVKRNF SDKEKTDQLR 1140 EWVSFRGQTL SRTVRGMMYY RMSLELQCYQ EYTGEDDTND GYLSSASNEN FMNRARALAD 1200 LKFTYVVSCQ VYGNQKKSSE GRDRSCYNNI LQLMLKYPSL RVAYIDEREE TVNNKSQKVF 1260 YSVLLKGGNK LDEEIYRIKL PGNPTEIGEG KPENQNHAII FTRGEALQTI DMNQDNYFEE 1320 SFKMRNVLQE FDEGRRGKRN PTILGLREHI FTGSVSSLAW FMSNQETSFV TIGQRVLANP 1380 LRVRFHYGHP DIFDRIFHIT RGGISKASKI INLSEDIFAG YNSTLRGGYI THHEYIQAGK 1440 GRDVGMNQIS IFEAKVANGN GEQTLSRDVY RLGRRFDFYR MLSFYFTTVG FYFSSMITVV 1500 TVYVFLYGRL YLVLSGLEKE ILQSATIHQS KALEEALAAQ TVFQLGFLMV LPMVMEIGLE 1560 KGFRTALGDF IIMQLQLASV FFTFQLGTKA HYFGRTVLHG GSKYRATGRG FVVFHAKFAE 1620 NYRLYSRSHF VKGLELVILL VVYQVYGNSY RSSSLYLYIT FSMWFLVSSW LFAPFIFNPS 1680 GFEWQKTVDD WTDWKRWMGN RGGIGIVVEK SWESWRESEQ EHLKHTNLGG RVLEILLALR 1740 FLLYQYGIVY HLNVAHRDTT LLVYGLSWAV LLSVLLVLKM VSMGRRKFGT DFQVMFRILK 1800 ALLFLGFLSV MTVLFVVCGL TISDLCASFL AFLPTGWAIL LIGQTLRGVL KGIGIWDSIK 1860 ELGRAYEYIM GLLIFTPIAV LSWFPFVSEF QTRLLFNQAF SRGNSASRES QKAPYRPDET 1920 FLLLVVTDPR KMQHGGNKSG KSSTNVWANN ANLAKTMGAL DEFKSGFPSK GLATVSNKWW 1980 GTGGQRQDVT EDGGDVKDEE AASEKQSSLL GIRKRIAEEG REALELGVSQ GFGSKRPDKR 2040 DQHLLSQIFG SSLPKEWVND SS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 5.0e-6 | 56 | 178 | 138 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 3.0e-49 | 343 | 445 | 104 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1043 | 1760 | 808 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF24822.1 | 0 | 1 | 1903 | 1 | 1911 | AC007592_15 F12K11.17 [Arabidopsis thaliana] |
| RefSeq | NP_172136.1 | 0 | 1 | 1903 | 1 | 1914 | ATGSL07 (glucan synthase-like 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_191469.2 | 0 | 22 | 1903 | 13 | 1915 | ATGSL11 (glucan synthase-like 11); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q9LYS6 | 0 | 22 | 1903 | 13 | 1902 | CALS6_ARATH RecName: Full=Putative callose synthase 6; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 11 |
| RefSeq | XP_002526651.1 | 0 | 1 | 1903 | 1 | 1890 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
