| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032584 |
| Family | GH9 |
| Protein Properties | Length: 518 Molecular Weight: 57166.4 Isoelectric Point: 6.874 |
| Chromosome | Chromosome/Scaffold: 09 Start: 36726613 End: 36731320 |
| Description | cellulase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 46 | 508 | 0 |
| NYKDALTKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGDLMNSELPNAEDAVRWGTDFLLK ATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDNNNPGSDIAGEVAAALAAASIVFRKCDPSYSNLLLQRAITVFTFADKYRGPYSAGLKPEVCP FYCSYSGYQDELLWGAAWLHKATSNPTYLSYVQANGRNLGADEFDNMFSWDNKHVGARILLSKEFLIHTTKKECQNVKALEEYKEHADSFICSVIPGAPF SSSQYTPGGLLFKMSGSNMQYVTSTSFLLLTYAKYLTSARTVVYCGGSVVTPARLRSIAKNQVDYLLGDNPLKMSYMVGYGSKYPHRIHHRGSSLPSVAA HPTKIQCHDGFSMFNSQSPNPNDLTGAVVGGPDQNDQFPDERSDYQRSEPATYINAPLVGALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 518 Download |
| MSLTISSSRL IATFMVLLLL LSSGFSSPSS STLRSIHQRY HLDNHNYKDA LTKSILFFEG 60 QRSGKLPPNQ RMTWRSNSGL SDGSALNVDL VGGYYDAGDN MKFGFPMAFT TTMLSWSLIE 120 FGDLMNSELP NAEDAVRWGT DFLLKATSHP DTIYVQVGDP NMDHACWERP EDMDTPRSVF 180 KVDNNNPGSD IAGEVAAALA AASIVFRKCD PSYSNLLLQR AITVFTFADK YRGPYSAGLK 240 PEVCPFYCSY SGYQDELLWG AAWLHKATSN PTYLSYVQAN GRNLGADEFD NMFSWDNKHV 300 GARILLSKEF LIHTTKKECQ NVKALEEYKE HADSFICSVI PGAPFSSSQY TPGGLLFKMS 360 GSNMQYVTST SFLLLTYAKY LTSARTVVYC GGSVVTPARL RSIAKNQVDY LLGDNPLKMS 420 YMVGYGSKYP HRIHHRGSSL PSVAAHPTKI QCHDGFSMFN SQSPNPNDLT GAVVGGPDQN 480 DQFPDERSDY QRSEPATYIN APLVGALAYL ARPFGQV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 0 | 36 | 517 | 484 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 44 | 511 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 46 | 508 | 467 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 39 | 511 | 476 | + cellulase | ||
| PLN02613 | PLN02613 | 0 | 42 | 510 | 473 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC16418.1 | 0 | 1 | 512 | 1 | 500 | endo-1,4-beta glucanase [Arabidopsis thaliana] |
| RefSeq | NP_171779.1 | 0 | 1 | 512 | 1 | 500 | ATCEL2; cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_192138.1 | 0 | 11 | 517 | 16 | 516 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002301487.1 | 0 | 13 | 517 | 9 | 511 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002320998.1 | 0 | 1 | 517 | 1 | 510 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 45 | 510 | 3 | 428 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 1ksc_A | 0 | 45 | 510 | 3 | 428 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 1ks8_A | 0 | 45 | 510 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 46 | 515 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 46 | 515 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
