| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra032705 |
| Family | GT2 |
| Protein Properties | Length: 713 Molecular Weight: 81823 Isoelectric Point: 8.5303 |
| Chromosome | Chromosome/Scaffold: 04 Start: 5323794 End: 5345116 |
| Description | cellulose synthase like A14 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT2 | 114 | 245 | 7e-28 |
| QIPMYNEREVFELSIGAACRLMWPSDRLIVQVLDDSTDPDIMELISTECAKWAKDINIKYERRDNRNGYKAGALKHGMRHSYVKQCNYVVIFDADFQPET DYLQRTIPFLIHNPELALVQARWKFDSLSPYL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 713 Download |
| MVLLPKPLIF LHDLSLALFT FHEEGLKASV DGVGLSMYTM WNSMRSTLIV PVFRCLVALC 60 LIISVLVSIE SVYMNLVILY VKLFGRKPEK VYKWEEMQKD MELGHQNYPV ILIQIPMYNE 120 REVFELSIGA ACRLMWPSDR LIVQVLDDST DPDIMELIST ECAKWAKDIN IKYERRDNRN 180 GYKAGALKHG MRHSYVKQCN YVVIFDADFQ PETDYLQRTI PFLIHNPELA LVQARWKFDS 240 LSPYLFVLAM ECLSRLLLSR YDAGYIGYHP RTEELKILHL MFADDVMVFF DGTANSLHGI 300 SECLDDFASW SGLHINTTKT ELFTVGSDQS ESVAITRYGL TPGKFPIRYL GLPLTSRKLK 360 ISEYAPLMSK ITTRLQSLSA KLLSFSGRLQ LLKTVIFGIV TFWISAFILP KGLNANTCLL 420 TRMQEMSLNY HFMAEQQSGS TRHAFFGFNG TAGVWRIAAM EEAGGWKDRT TVEDMDLAVR 480 VGLLGWKFVF INDVEVKSEL PSQFKAFRFQ QHRWSCGPAN LFRKMTMEII HNQRVKIWKK 540 FYVIYSFFFL RKIMIHSFTF FFYCVILPIS VFVPEVKIPN WATIYVPSVI TLLSAIATPR 600 SFYLLIFWVL FENVMAMHRA KGTLIGLFEG GRVNEWVVTE KLGDSVTTEL LPQSRKPRYG 660 FLERVNSKEM VMGIYILCCA CYDFFFGNAF LYLYLLMQAA AFLISGVGFV GS* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06421 | CESA_CelA_like | 3.0e-7 | 429 | 522 | 96 | + CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. | ||
| cd06423 | CESA_like | 1.0e-17 | 113 | 237 | 127 | + CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. | ||
| cd06421 | CESA_CelA_like | 5.0e-28 | 109 | 247 | 140 | + CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. | ||
| cd06437 | CESA_CaSu_A2 | 5.0e-57 | 413 | 518 | 106 | + Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. | ||
| cd06437 | CESA_CaSu_A2 | 2.0e-61 | 109 | 312 | 206 | + Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003723 | RNA binding |
| GO:0003964 | RNA-directed DNA polymerase activity |
| GO:0006278 | RNA-dependent DNA replication |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC43295.1 | 1e-18 | 191 | 294 | 1 | 88 | putative glucosyltransferase [Arabidopsis thaliana] |
| DDBJ | BAC43295.1 | 0 | 413 | 712 | 49 | 348 | putative glucosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_173818.1 | 0 | 413 | 712 | 253 | 552 | ATCSLA10; cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_193077.2 | 0 | 12 | 294 | 12 | 281 | ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_193077.2 | 0 | 413 | 712 | 242 | 537 | ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hg6_A | 0.000000002 | 103 | 250 | 134 | 290 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 4hg6_A | 0.0000002 | 407 | 517 | 278 | 386 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 2z86_D | 0.0006 | 113 | 253 | 97 | 230 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 2z86_C | 0.0006 | 113 | 253 | 97 | 230 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 2z86_B | 0.0006 | 113 | 253 | 97 | 230 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
