| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra033337 |
| Family | GH3 |
| Protein Properties | Length: 763 Molecular Weight: 82314.9 Isoelectric Point: 8.7253 |
| Chromosome | Chromosome/Scaffold: 10 Start: 4155872 End: 4159176 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 70 | 317 | 0 |
| AAIPRLGIKGYEWWSEALHGVSNVGPGTKFAGPFPAATSFPQVITTAASFNASLWESIGRVVSNEARAMYNGGVGGLTYWSPNVNILRDPRWGRGQETPG EDPVLAGKYAASYVRGLQGNDRSRLKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGNVASIMCSYNQVNGVPTCADPNLLKK TIRNQWGLNGYIVSDCDSVGVLYDTQHYTGTPEEAAAKSIKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 763 Download |
| MAFLAAILFF FVSSSIHVHS RETFACDTKD AATATLRFCQ QSVPIPERVK DLIGRLTLAE 60 KVSLLGNTAA AIPRLGIKGY EWWSEALHGV SNVGPGTKFA GPFPAATSFP QVITTAASFN 120 ASLWESIGRV VSNEARAMYN GGVGGLTYWS PNVNILRDPR WGRGQETPGE DPVLAGKYAA 180 SYVRGLQGND RSRLKVAACC KHFTAYDLDN WNGVDRFHFN AKVSKQDIED TFDVPFRMCV 240 KEGNVASIMC SYNQVNGVPT CADPNLLKKT IRNQWGLNGY IVSDCDSVGV LYDTQHYTGT 300 PEEAAAKSIK AGLDLDCGPF LGAHTIDAVN KNLLRESDVD NAVVNTLTVQ MRLGMFDGDI 360 ATQPYGHLGS AHVCTPVHKG LALEAAHQGI VLLKNLGPSL PLSRHRHRTV AVIGPNSDAT 420 VTMIGNYAGI ACGYTSPVQG IAGYARTVHN KGCEDVHCMD DRLFDGAADA ARGSDATVLV 480 MGLDQSIEAE FKDRNSLLLP GKQQELISRV ARASKGPVVL VLMSGGPIDV TFAEKDPKIS 540 AIVWAGYPGQ EGGRAIADIL FGAANPGGKL PMTWYPQEYL TNLPMTEMSM RAIRSKRIPG 600 RTYRFYDGPV VYPFGHGLSY TRFTHSIADA PKVIPIAVRG RNGTVSGKSV RVTHARCNRL 660 SLGVHVDIKN VGTRDGTHTM LVFSAPPSGE WAPRKQLVAF TRVHVAAGEN KRVQVNIHVC 720 KYLSVVDRAG IRRIPIGDHG IHIGDESHTV SLQASTLGVI KS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-57 | 390 | 622 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 2.0e-59 | 69 | 454 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 4.0e-66 | 50 | 349 | 306 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 2.0e-77 | 107 | 717 | 659 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 21 | 754 | 757 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG10624.1 | 0 | 1 | 762 | 1 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_563659.1 | 0 | 1 | 762 | 6 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002270249.1 | 0 | 7 | 762 | 12 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316021.1 | 0 | 18 | 762 | 22 | 768 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515300.1 | 0 | 22 | 762 | 26 | 768 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 107 | 717 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3u48_A | 0 | 107 | 717 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3u4a_B | 0 | 107 | 717 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3u4a_A | 0 | 107 | 717 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 2x41_A | 5.60519e-45 | 47 | 755 | 2 | 710 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
