| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra033549 |
| Family | GH17 |
| Protein Properties | Length: 358 Molecular Weight: 39240.6 Isoelectric Point: 7.1787 |
| Chromosome | Chromosome/Scaffold: 01 Start: 11193634 End: 11195432 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 26 | 336 | 0 |
| VGVCYGMMGNNLPSKPDTIALFRQNNIRRVRLYDPNQEALNALKNTGIEVLVGVPNSDLRSLTNPSSARAWLQNNVLNHYPAVNFKYIAVGNEVIPSNGG GDVLPAMRNVYDALRGANLQDRIKVSTAVDMTLIGNSFPPSAGEFRGDVRWYIDPIIGFLTSTNSVLLANIYPYFSYIGNPRDISLSYALFTSPNVIVWD GSRGYQNLFDALLDVVYSAVERSGGGSLPVVVSESGWPSNGGNAASFDNARAYYTNLAARVRENRGTPKRPGRGVEMYLFAMFDENQKNPEIEKNFGLFF PNKQPKFPIAF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 358 Download |
| MSPMIPLYLL LALFATILAP TSGEPVGVCY GMMGNNLPSK PDTIALFRQN NIRRVRLYDP 60 NQEALNALKN TGIEVLVGVP NSDLRSLTNP SSARAWLQNN VLNHYPAVNF KYIAVGNEVI 120 PSNGGGDVLP AMRNVYDALR GANLQDRIKV STAVDMTLIG NSFPPSAGEF RGDVRWYIDP 180 IIGFLTSTNS VLLANIYPYF SYIGNPRDIS LSYALFTSPN VIVWDGSRGY QNLFDALLDV 240 VYSAVERSGG GSLPVVVSES GWPSNGGNAA SFDNARAYYT NLAARVRENR GTPKRPGRGV 300 EMYLFAMFDE NQKNPEIEKN FGLFFPNKQP KFPIAFAGVR EGTAVERCCL NRDDDNM* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-7 | 55 | 324 | 287 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-155 | 26 | 336 | 313 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP87281.1 | 0 | 9 | 340 | 22 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
| GenBank | ABG49448.1 | 0 | 9 | 340 | 22 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
| GenBank | ACZ74626.1 | 0 | 6 | 340 | 19 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
| EMBL | CAB10405.1 | 0 | 4 | 304 | 1 | 303 | beta-1, 3-glucanase class I precursor [Arabidopsis thaliana] |
| RefSeq | NP_193361.4 | 0 | 4 | 346 | 1 | 344 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 26 | 337 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3f55_C | 0 | 26 | 337 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3f55_B | 0 | 26 | 337 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3f55_A | 0 | 26 | 337 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3em5_D | 0 | 26 | 337 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
