CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra033557
FamilyGT13
Protein PropertiesLength: 896 Molecular Weight: 101897 Isoelectric Point: 6.8211
ChromosomeChromosome/Scaffold: 06 Start: 26242459 End: 26248389
Descriptioncalcium-dependent protein kinase 26
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT13224110
  IQMRLFQTQSQYADRLSSALESENHCTSQLRSLIDQVSTKQSRILALEGKGIAKLTQGGQGPLAAVVIMACSRADYLERTVNSVLKYQSPIASKYPLFIS
  QDGSNQAVKSKSLSYTQLTYMQHLDFEPVITERPGELIAYYKIARHYKWALDQLFYKHKFSRVIILEDFFDYFEAAARLMDRDGTIMAASSWNDNGQKQF
  VHDPYALYRSDFFPGLGWMLKRSTWDELSPKWPKAYPYIRLSISMAMRLKENHKGRQFVRPEVCRTYNFGEHGSSLGQFFSQYLEPIKLNDVKVDWNAMD
  LGYLTEGNYTKYFSGLVRQARPIQGSDLVLKAQNINGDVRIRYEDQAEFERIAGEFGIFEEWKDGVPRTAYKGIVVFRIQTTRRVFLHKR
Full Sequence
Protein Sequence     Length: 896     Download
MARVPCDLRF LLIPAAFMFI YIQMRLFQTQ SQYADRLSSA LESENHCTSQ LRSLIDQVST    60
KQSRILALEG KGIAKLTQGG QGPLAAVVIM ACSRADYLER TVNSVLKYQS PIASKYPLFI    120
SQDGSNQAVK SKSLSYTQLT YMQHLDFEPV ITERPGELIA YYKIARHYKW ALDQLFYKHK    180
FSRVIILEDF FDYFEAAARL MDRDGTIMAA SSWNDNGQKQ FVHDPYALYR SDFFPGLGWM    240
LKRSTWDELS PKWPKAYPYI RLSISMAMRL KENHKGRQFV RPEVCRTYNF GEHGSSLGQF    300
FSQYLEPIKL NDVKVDWNAM DLGYLTEGNY TKYFSGLVRQ ARPIQGSDLV LKAQNINGDV    360
RIRYEDQAEF ERIAGEFGIF EEWKDGVPRT AYKGIVVFRI QTTRRVFLHK REDTMKHSGG    420
NQACFVLGQK TPSIRDLYSL GHKLGQGQFG TTYMCREIST GREYACKSIT KRKLISKEDV    480
EDVRREIQIM HHLAGYKNIV TIKGAYEDPL YVHIVMELCS GGELFDRIIQ RGHYSERKAA    540
ELIKIIVGVV EACHSLGVMH RDLKPENFLL VNKDDDFSLK AIDFGLSVFF KPGQIFEDVV    600
GSPYYVAPEV LLKHYGPEAD VWTAGVILYI LVSGVPPFWA ETQQGIFDAV LKGHIDFDSD    660
PWPLISDSAK DLIRGMLCSR PSERLTAHQV LRHPWICENG VAPDRALDPA VLSRLKQFSA    720
MNKLKQMALR VIAESLSEEE IAGLKEMFKA MDTDNSGAIT FDELKAGLRR YGSTLKDTEI    780
RDLMEAADID KSGTIDYGEF IAATIHLNKL DREEHLLSAF SYFDKDGSGY ITIDELQQAC    840
AEQGMSDVFL EDVIKEVDQD NDGRIDYGEF VAMMQKGIAG RTMRQSINMS LRKNA*        900
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd05123STKc_AGC1.0e-60444695264+
pfam00069Pkinase2.0e-86438696265+
smart00220S_TKc3.0e-92438696261+
cd02514GT13_GLCNAC-TI2.0e-15685408336+
pfam03071GNT-I013408430+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAC49405.104158921481calcium dependent protein kinase [Vigna radiata]
GenBankAAL68972.1041089267552calmodulin-like-domain protein kinase CPK2 [Cucurbita maxima]
GenBankABY55551.1041489266547calcium-dependent protein kinase [Swainsona canescens]
Swiss-ProtQ9SZM304158951481CDPKQ_ARATH RecName: Full=Calcium-dependent protein kinase 26
RefSeqXP_002313574.1041089269554calcium dependent protein kinase 5 [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ncg_A043887524480B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3mwu_A043887524480B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3igo_A043887524480A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
PDB3hzt_A04348762459A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
PDB3v5t_A04158766480A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7803213945028920
HO7972874914098930
HO4501854624268840
BU1036853514267760
HO780321664405053e-26
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907mPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.3Potri.004G206900.1
Potri.004G206900.2Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny