y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra033560 |
Family | GT8 |
Protein Properties | Length: 662 Molecular Weight: 76041.1 Isoelectric Point: 8.4204 |
Chromosome | Chromosome/Scaffold: 06 Start: 26236396 End: 26239266 |
Description | galacturonosyltransferase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 316 | 632 | 0 |
CLSLQLAADYFLLGFNEEEEDVVKKDAKFEDPSLYHYAIFSDNVLATSVVVNSTVLNAKQPEKHVFHIVTDKLNFAAMKMWFRVNAPADATIQVENINDF KWLNSSYCSVLRQLESARLKEYYFKANHPSSISAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLAPLWEVDMQGKVNGAVETCK ESFHRFDKYLNFSNPKISENFDAGACGWAFGMNMFDLREWRKRNITGIYHYWQDMNEDRTLWKLGSLPPGLITFYNLTYAMERSWHVLGLGYDPALNQTA IENAAVVHYNGNYKPWL |
Full Sequence |
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Protein Sequence Length: 662 Download |
MMMMMMPRCF VSLIQAFFLS LVLLLLHHVG GESQAASSHH RELLAYRRPL QDCPGCTTTT 60 ASSLPALHYD PDLKDVNIVA TYSDHHGNIR LGSVKMGHLS SSWLFHNPLL PLPNNNKPPS 120 QTENHFPHVE FTSPAKLKRQ SLRQERRAQR TLELIQQDKE SDKQMQEAAI HKSMTFENSL 180 VGKYSIWRRD FESPNADAIL KLMRDQIIMA KAYAHIAKSK NASNLYLFLM QQSRENQRVL 240 GKATSDADLP SRALEQAKAM GHALSLAKDE LYDCHELAKK FRAMLQSTER NVDGLKKKGT 300 FLIQLAAKTF PQPLHCLSLQ LAADYFLLGF NEEEEDVVKK DAKFEDPSLY HYAIFSDNVL 360 ATSVVVNSTV LNAKQPEKHV FHIVTDKLNF AAMKMWFRVN APADATIQVE NINDFKWLNS 420 SYCSVLRQLE SARLKEYYFK ANHPSSISAG ADNLKYRNPK YLSMLNHLRF YLPEVYPKLD 480 KILFLDDDIV VQKDLAPLWE VDMQGKVNGA VETCKESFHR FDKYLNFSNP KISENFDAGA 540 CGWAFGMNMF DLREWRKRNI TGIYHYWQDM NEDRTLWKLG SLPPGLITFY NLTYAMERSW 600 HVLGLGYDPA LNQTAIENAA VVHYNGNYKP WLGLAFAKYK PYWSKYVEYD NPYLRLCNIN 660 E* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 2.0e-163 | 197 | 661 | 468 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 7.0e-167 | 194 | 658 | 482 | + galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 43 | 661 | 646 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 192 | 660 | 469 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 192 | 659 | 470 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB37483.1 | 0 | 40 | 661 | 7 | 658 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_195540.2 | 0 | 12 | 661 | 5 | 680 | GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q0WQD2 | 0 | 12 | 661 | 5 | 680 | GAUT3_ARATH RecName: Full=Probable galacturonosyltransferase 3 |
RefSeq | XP_002328269.1 | 0 | 61 | 661 | 30 | 654 | glycosyltransferase, family GT8 [Populus trichocarpa] |
RefSeq | XP_002533896.1 | 0 | 74 | 661 | 39 | 642 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.000002 | 458 | 631 | 75 | 252 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 1g9r_A | 0.000002 | 458 | 631 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.00002 | 458 | 631 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |