| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra033591 |
| Family | GH9 |
| Protein Properties | Length: 491 Molecular Weight: 54858.5 Isoelectric Point: 9.1274 |
| Chromosome | Chromosome/Scaffold: 06 Start: 26089108 End: 26091721 |
| Description | glycosyl hydrolase 9B17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 23 | 482 | 0 |
| NYSDALKKSILFFEGQRSGYLPREQRMTWRRDSALNDGKNLNADLVGGYYDAGDNVKFHFPMAFSATMLAWSAVDFGSYMSPADLRENLVALRWGTDYLL KTVSQLRNRIFVHVGEVEKDHQCWQRPEDMSTPRTAYAVETQYPASDLAGEITAAFAAASIAFKRYDPSYAQRLLKNALKTFKYADSHRGSYTNNTWVKL AVCPFYCSINGYGDELLWGAAWLRRATGKASYSKYLVDNRHSLGAVFNYYEFGWDNKVGGVNVLVAKEAFEKNVPEIAPYRDTAEQMMCAYFPETAGPHM TYTPGGLLYKPGSNILQNTVALSFLLLTYAGYLSKSSQQLHCGSVKIHPESLRHLAKRQMDYILGDNPMKMSYMIGYGNHYPRKIHHRGASSPSIATHPK TIKCLEGWNIFASPKPDPNILVGAVVGGPNVDDKFVGGRNNASETEPTTYINAPFVGLLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MKPSICSSIY LLFVLLPTVI SHNYSDALKK SILFFEGQRS GYLPREQRMT WRRDSALNDG 60 KNLNADLVGG YYDAGDNVKF HFPMAFSATM LAWSAVDFGS YMSPADLREN LVALRWGTDY 120 LLKTVSQLRN RIFVHVGEVE KDHQCWQRPE DMSTPRTAYA VETQYPASDL AGEITAAFAA 180 ASIAFKRYDP SYAQRLLKNA LKTFKYADSH RGSYTNNTWV KLAVCPFYCS INGYGDELLW 240 GAAWLRRATG KASYSKYLVD NRHSLGAVFN YYEFGWDNKV GGVNVLVAKE AFEKNVPEIA 300 PYRDTAEQMM CAYFPETAGP HMTYTPGGLL YKPGSNILQN TVALSFLLLT YAGYLSKSSQ 360 QLHCGSVKIH PESLRHLAKR QMDYILGDNP MKMSYMIGYG NHYPRKIHHR GASSPSIATH 420 PKTIKCLEGW NIFASPKPDP NILVGAVVGG PNVDDKFVGG RNNASETEPT TYINAPFVGL 480 LAYFNANKKN * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 2.0e-162 | 10 | 482 | 476 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-165 | 23 | 482 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 8 | 487 | 482 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 9 | 487 | 481 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 17 | 484 | 468 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28672.1 | 0 | 23 | 487 | 25 | 489 | unknown [Arabidopsis thaliana] |
| EMBL | CAB38821.1 | 0 | 22 | 487 | 6 | 471 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_195611.1 | 0 | 23 | 487 | 25 | 489 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568050.1 | 0 | 17 | 487 | 21 | 493 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q9SVJ4 | 0 | 1 | 487 | 1 | 492 | GUN22_ARATH RecName: Full=Endoglucanase 22; AltName: Full=Endo-1,4-beta glucanase 22; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 20 | 482 | 1 | 426 | A Chain A, Archaeal Exosome Core |
| PDB | 1ksc_A | 0 | 20 | 482 | 1 | 426 | A Chain A, Archaeal Exosome Core |
| PDB | 1ks8_A | 0 | 20 | 482 | 1 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 23 | 482 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 23 | 482 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
