| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra033592 |
| Family | GH9 |
| Protein Properties | Length: 493 Molecular Weight: 54872.1 Isoelectric Point: 6.7331 |
| Chromosome | Chromosome/Scaffold: 06 Start: 26086002 End: 26088199 |
| Description | glycosyl hydrolase 9B17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 23 | 483 | 0 |
| DYSEALRKSILFFEGQRSGRLPKQQRMTWRGDSALKDGKNLNTDLVGGYYDAGDNIKFHFPMAFTATMLAWSSIDFQSYMSQNDVGHNLIALKWATDYLL KTVSQLPNRIFVQVGEAQADHNCWERPEDMDTPRTAFALDAPGPASDLAGEIAAALAAASIAFKQSRPKYSEVLLDKAIKTFQYADSHRGCYTDNPNVHN AVCPFYCSVNGYKDELLWGAAWLRRATGNDYYLEYLVNNRQAFGQDFNYLEFGWDNKYGGVNVLIAKEIFEKGAIALTAYKDAAEEMMCAFFPETSGPHH MSYTPGGLLYKPGNSQLQNMAALSFLILTYADYLSKSSQQLNCGNHQFQPDSLRRIVKRQVDYILGDNPAKLSYMVGYGDQYPRQIHHRGASIPSIKVQR NAFGCLKGWDIFASPNPDPNILVGAVIGGPDVDDSFIGKRTNASDTEPTTYINAPLVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MKPSFFILTV LALLLLPTAI PHDYSEALRK SILFFEGQRS GRLPKQQRMT WRGDSALKDG 60 KNLNTDLVGG YYDAGDNIKF HFPMAFTATM LAWSSIDFQS YMSQNDVGHN LIALKWATDY 120 LLKTVSQLPN RIFVQVGEAQ ADHNCWERPE DMDTPRTAFA LDAPGPASDL AGEIAAALAA 180 ASIAFKQSRP KYSEVLLDKA IKTFQYADSH RGCYTDNPNV HNAVCPFYCS VNGYKDELLW 240 GAAWLRRATG NDYYLEYLVN NRQAFGQDFN YLEFGWDNKY GGVNVLIAKE IFEKGAIALT 300 AYKDAAEEMM CAFFPETSGP HHMSYTPGGL LYKPGNSQLQ NMAALSFLIL TYADYLSKSS 360 QQLNCGNHQF QPDSLRRIVK RQVDYILGDN PAKLSYMVGY GDQYPRQIHH RGASIPSIKV 420 QRNAFGCLKG WDIFASPNPD PNILVGAVIG GPDVDDSFIG KRTNASDTEP TTYINAPLVG 480 VFAYFKSNPN FS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 9.0e-161 | 23 | 483 | 464 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 5.0e-165 | 23 | 483 | 467 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 22 | 492 | 471 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 22 | 490 | 469 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 22 | 485 | 464 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28672.1 | 0 | 23 | 492 | 25 | 493 | unknown [Arabidopsis thaliana] |
| EMBL | CAB38821.1 | 0 | 22 | 492 | 6 | 475 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_195611.1 | 0 | 23 | 492 | 25 | 493 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568050.1 | 0 | 22 | 492 | 28 | 497 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q9SVJ4 | 0 | 1 | 489 | 1 | 493 | GUN22_ARATH RecName: Full=Endoglucanase 22; AltName: Full=Endo-1,4-beta glucanase 22; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 20 | 483 | 1 | 426 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ksc_A | 0 | 20 | 483 | 1 | 426 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ks8_A | 0 | 20 | 483 | 1 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 23 | 483 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 23 | 483 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
