| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra033641 |
| Family | GH17 |
| Protein Properties | Length: 433 Molecular Weight: 46606.4 Isoelectric Point: 6.2547 |
| Chromosome | Chromosome/Scaffold: 06 Start: 25851002 End: 25853806 |
| Description | Glycosyl hydrolase family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 28 | 343 | 0 |
| IGVNYGQTADNLPPPSATAKLLQSTSIQKVRLYGSDPAIIKALANTGIEIVIGTGDVPGLASDPSFARSWVETNVVPYYPASKITLIDVGNEATTFGDRN FMLQLLPAMKNVQSALEAASLGGKIKVSTVHTMSILSQSDPPSAGVFAADHADILKGLLEFNRETGSPFAVNPYPFFAYQSDPRPETLAFCLFQPNPGRV DANSKIKYMNMFDAQVDAVYSALSSFGFKDVEIVVAETGWPYKGDPDEVGTTIENAKAYNKNLIAHLKSMAGTPLMPGKVIETYLFALYDENLKPGKGSE RAFGLFKPDLTMTYDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MEPSVYRLFL LFFLCLYGLH QTKSQPFIGV NYGQTADNLP PPSATAKLLQ STSIQKVRLY 60 GSDPAIIKAL ANTGIEIVIG TGDVPGLASD PSFARSWVET NVVPYYPASK ITLIDVGNEA 120 TTFGDRNFML QLLPAMKNVQ SALEAASLGG KIKVSTVHTM SILSQSDPPS AGVFAADHAD 180 ILKGLLEFNR ETGSPFAVNP YPFFAYQSDP RPETLAFCLF QPNPGRVDAN SKIKYMNMFD 240 AQVDAVYSAL SSFGFKDVEI VVAETGWPYK GDPDEVGTTI ENAKAYNKNL IAHLKSMAGT 300 PLMPGKVIET YLFALYDENL KPGKGSERAF GLFKPDLTMT YDIGLTKTTN QTSMAPQSPT 360 PRLPPAAAPT SQTLPAPPQM ILPSPTSPSD KNSGQTDVHN STPRSASLAH LCSSLSVPSM 420 MLFVSVMYAL II* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-7 | 27 | 336 | 322 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-102 | 28 | 343 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10628.1 | 0 | 1 | 357 | 1 | 351 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_199086.2 | 0 | 1 | 414 | 1 | 418 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002282736.1 | 0 | 11 | 381 | 11 | 384 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301872.1 | 0 | 24 | 349 | 1 | 328 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510373.1 | 0 | 9 | 364 | 11 | 366 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 28 | 343 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 25 | 346 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 25 | 346 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 25 | 346 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 25 | 346 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
