y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra034060 |
Family | GH1 |
Protein Properties | Length: 525 Molecular Weight: 60033 Isoelectric Point: 6.8271 |
Chromosome | Chromosome/Scaffold: 01 Start: 27651980 End: 27655099 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 37 | 511 | 0 |
RASFPEGFLFGTATAAYQVEGAVNETCRGPSLWDIYCKRFPSRCNYDNGDVAVDFFHRYKEDIQLMKNLNTDAFRMSIAWPRIFPHGRKEKGVSQAGVQF YHDLIDELKRNGITPFVTVFHWDTPQDLEDEYGGFLSERIVKDFREYADFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCSKYVKEECQEGRSG FEAYLVTHNLLNSHAEAVEAFRQCEKCKGGKIGIAHSPAWFEPHDLADSQDGASIDRALDFILGWHLDTTMYGDYPQIMKDIVGHRLPKFTDAQKAKLKN SADFVGLNYYTSVFSNHLEKPDPSKPRWMQDSLINWETKNAYNYSIGSKPITGALPVFARGFRSLLKYIKDKYGNPEIMIMENGYGEELGATDSVAVGTA DHNRKYYLQRHLLSMNEAICIDKVNVTGYFVWSLLDNFEWQDGYKNRFGLYYIDFKNNLTRYEKESGKYYKEFLS |
Full Sequence |
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Protein Sequence Length: 525 Download |
MALHKFPLMG LLLLLTIVVS PATADGPVCP PTTKLSRASF PEGFLFGTAT AAYQVEGAVN 60 ETCRGPSLWD IYCKRFPSRC NYDNGDVAVD FFHRYKEDIQ LMKNLNTDAF RMSIAWPRIF 120 PHGRKEKGVS QAGVQFYHDL IDELKRNGIT PFVTVFHWDT PQDLEDEYGG FLSERIVKDF 180 REYADFVFQE YGGKVKHWIT FNEPWVFSHA GYDVGKKAPG RCSKYVKEEC QEGRSGFEAY 240 LVTHNLLNSH AEAVEAFRQC EKCKGGKIGI AHSPAWFEPH DLADSQDGAS IDRALDFILG 300 WHLDTTMYGD YPQIMKDIVG HRLPKFTDAQ KAKLKNSADF VGLNYYTSVF SNHLEKPDPS 360 KPRWMQDSLI NWETKNAYNY SIGSKPITGA LPVFARGFRS LLKYIKDKYG NPEIMIMENG 420 YGEELGATDS VAVGTADHNR KYYLQRHLLS MNEAICIDKV NVTGYFVWSL LDNFEWQDGY 480 KNRFGLYYID FKNNLTRYEK ESGKYYKEFL SQGVRPSMIN RDEL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 2.0e-107 | 35 | 511 | 483 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 3.0e-116 | 32 | 510 | 482 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-133 | 40 | 508 | 478 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-143 | 41 | 506 | 473 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 5.0e-172 | 36 | 511 | 480 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB38783.1 | 0 | 1 | 524 | 1 | 525 | beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAB38784.1 | 0 | 88 | 524 | 1 | 437 | beta-glucosidase [Brassica nigra] |
DDBJ | BAH20034.1 | 0 | 1 | 524 | 1 | 524 | AT3G09260 [Arabidopsis thaliana] |
EMBL | CAA61592.1 | 0 | 1 | 524 | 1 | 524 | thioglucoside glucohydrolase [Arabidopsis thaliana] |
RefSeq | NP_187537.1 | 0 | 1 | 524 | 1 | 524 | PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 30 | 510 | 27 | 503 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3ptq_A | 0 | 30 | 510 | 27 | 503 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3ptm_B | 0 | 30 | 510 | 27 | 503 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3ptm_A | 0 | 30 | 510 | 27 | 503 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3ptk_B | 0 | 30 | 510 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |