| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra034218 |
| Family | GT48 |
| Protein Properties | Length: 1783 Molecular Weight: 206881 Isoelectric Point: 9.3987 |
| Chromosome | Chromosome/Scaffold: 01 Start: 26872013 End: 26877637 |
| Description | glucan synthase-like 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 876 | 1631 | 0 |
| VPVNLEARRRIAFFSNSLFMNLPHAPQVEKMLAFSVMTPYYSEEVVYSKEQLRNETEDGISTLYYLQTIYADEWKNFKERMRREGIKTDVELWTTKLREL RLWASYRGQTLARTVRGMMYYYRALKMLAFLDSASEMDIREDAQELGSMRSSQGNRLDGVDDVNDGSSLSRATSSVSMLYKGHEHGTALMKFTYVVACQI YGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVHAGRGETEYYSVLVKYDHTLEREVEIFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDNY FEEALKMRNLLQEFRHYHGIRKPTILGVREHIFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIF AGFNCTLRGGNVTHHEYIQVGKGRDVGLNQISMFEAKVASGNGEQVLSRDVYRLGHRLDFFRMLSFFYTTVGFFFNTMMVILTVYAFLWGRVYLALSGVE KSALADSTDTNAALAVILNQQFIIQLGLFTALPMIVEWSLEEGFLLAIWNFIRMQIQLSSVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKSFT ENYRLYARSHFVKAIELGLILIVYATHSPIAKDSLIYIAMTLTSWFLVISWILAPFVFNPSGFDWLKTVYDFEGFMNWIWYQGRISTKSEQSWEIWWYEE QDHLRTTGIPGRIVEIILDLRFFFFQYGIVYQLKIANGSTSILVYLLSWIYIFAVF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1783 Download |
| MSLRHRTVPS QPGRPPAAGA IEDEPYNIIP VNNLLADHPS LRYPEVRAAA AALKTVGDLR 60 RPTYVQWRPH YDLLDWLALF FGFQKDNVRN QREHLVLHLA NAQMRLSPPP DNIDSLDPAV 120 VRRFRRKLLG NYSSWCSYLG RKSNIWISDR TPDSRRELLY VGLYLLVWGE AANLRFMPEC 180 ICYIFHNMAS ELNKILEDCL DESTGQPYSP KITGENSFLN GVVKPIYDTI RAEINESKNG 240 TEPHCKWRNY DDINEYFWTD RCFSKLKWPI DLGSSFFKNS RGSGVGKTGF VERRTFFYLY 300 RSFDRLWVML ALFLQAAIIV AWEEKPGGGS VTSQLWNALK STDVQVRLLT VFLTWSGMRL 360 LQAVLDAGSQ RSLISRETKR LFFRMLMKVV AATVWIIAFI VLYTNIWKQR KQDRQWSRAA 420 NDKIYQFLYA VVAFLVPEIL ALALFIVPWI RNFLEETNWK IFFALTWWFQ GKSFVGRGLR 480 EGLVDNIKYS TFWIFVLATK FTFSYFLQVK PMIKPSKLLW NLKEVDYEWH QFFGESNRFS 540 VLLLWLPVVL IYLMDIQIWY AIYSSIVGAV VGLFDHLGEI RDMGQLRLRF QFFASAIQFN 600 LMPEEQLLNA RGFGNKLKDA IHRLKLRYGL GRPFKKLESN QVEANKFALI WNEIILAFRE 660 EDIVSDREVE LLELPKNSWN VTVIRWPCFL LCNELLLALS QAKELVDAPD KWLWHKICKN 720 EYRRCAVVEA YESIKHLLLS IIKIDTEEHK IVTIFFQMIE VSIQGEQFTK TFKVDLLPKI 780 YETLQKLVGL LNDEKVDVGR VVNGLQSIYE IATRQFFIEK KTTEQLSTEG LTPHDPASKL 840 LFQNAVRLPD ASNEDFFRQV RRLHTILTSR DSMHSVPVNL EARRRIAFFS NSLFMNLPHA 900 PQVEKMLAFS VMTPYYSEEV VYSKEQLRNE TEDGISTLYY LQTIYADEWK NFKERMRREG 960 IKTDVELWTT KLRELRLWAS YRGQTLARTV RGMMYYYRAL KMLAFLDSAS EMDIREDAQE 1020 LGSMRSSQGN RLDGVDDVND GSSLSRATSS VSMLYKGHEH GTALMKFTYV VACQIYGSQK 1080 AKKEPQAEEI LYLMKQNEAL RIAYVDEVHA GRGETEYYSV LVKYDHTLER EVEIFRVKLP 1140 GPVKLGEGKP ENQNHAMIFT RGDAVQTIDM NQDNYFEEAL KMRNLLQEFR HYHGIRKPTI 1200 LGVREHIFTG SVSSLAWFMS AQETSFVTLG QRVLANPLKV RMHYGHPDVF DRFWFLSRGG 1260 ISKASRVINI SEDIFAGFNC TLRGGNVTHH EYIQVGKGRD VGLNQISMFE AKVASGNGEQ 1320 VLSRDVYRLG HRLDFFRMLS FFYTTVGFFF NTMMVILTVY AFLWGRVYLA LSGVEKSALA 1380 DSTDTNAALA VILNQQFIIQ LGLFTALPMI VEWSLEEGFL LAIWNFIRMQ IQLSSVFYTF 1440 SMGTRAHYFG RTILHGGAKY RATGRGFVVE HKSFTENYRL YARSHFVKAI ELGLILIVYA 1500 THSPIAKDSL IYIAMTLTSW FLVISWILAP FVFNPSGFDW LKTVYDFEGF MNWIWYQGRI 1560 STKSEQSWEI WWYEEQDHLR TTGIPGRIVE IILDLRFFFF QYGIVYQLKI ANGSTSILVY 1620 LLSWIYIFAV FVFFLVIQYA RDKYSARNHI RYRLVQFLLI VFGTLVIVAL LEFTHFSFVD 1680 IFTSLLAFVP TGWGILLIAQ ALRPALQKIG LIWNAVVSLA RLYDILFGIV IMVPVAFMSW 1740 MPGFQSMQTR ILFNEAFSRG LRIMQIVTGK KSKGDVEVEK RR* 1800 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5409 | COG5409 | 0.001 | 1489 | 1685 | 202 | + EXS domain-containing protein [Signal transduction mechanisms] | ||
| pfam14288 | FKS1_dom1 | 3.0e-46 | 171 | 271 | 101 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 874 | 1651 | 842 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB84371.1 | 0 | 24 | 1774 | 23 | 1768 | 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] |
| RefSeq | NP_001044278.1 | 0 | 26 | 1772 | 25 | 1787 | Os01g0754200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_192264.1 | 0 | 1 | 1776 | 1 | 1780 | ATGSL05 (GLUCAN SYNTHASE-LIKE 5); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_567278.1 | 0 | 16 | 1772 | 6 | 1767 | GSL1 (GLUCAN SYNTHASE-LIKE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002517915.1 | 0 | 2 | 1772 | 3 | 1767 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
