| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra034441 |
| Family | GT66 |
| Protein Properties | Length: 514 Molecular Weight: 56916.7 Isoelectric Point: 8.2766 |
| Chromosome | Chromosome/Scaffold: 05 Start: 14039820 End: 14043459 |
| Description | staurosporin and temperature sensitive 3-like b |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 109 | 434 | 0 |
| KYQLNDIKLFQTFLRINVTSAILVGGIALGVGTTSGYISPWTRRFYSLLDPLMQRITFPLLPLFLSISLRHDATIFIVMYGLTSLYFAGVMIRLILVATP AICLISAIAVSATVKHLTSLLRAEQKVPQTGSSKGPGSSKASSKVTLDPSQPFQRNGAIALLVGVFYLLTARGAHGNRIIFDDYCEAYYWLRQNTPTDAK VMSWWDYGYQITAMGNITVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVNYVLVVFGGVTGYSSDDINKFLWMVRIGGGVDPVIKEPDYLVNGEL RVDKGASPKMLNCLMYKLCYYRFGEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 514 Download |
| MTRPKSSTSP SRLCLLTVNK HHNEAGLVDA ALIAICPGYI SRSVAGSYDN EAVAIFALLL 60 TFYLFVKAVN TGSLSWALGS AFGYFYMVSS WGGYVFIINL VFYFLDWMKY QLNDIKLFQT 120 FLRINVTSAI LVGGIALGVG TTSGYISPWT RRFYSLLDPL MQRITFPLLP LFLSISLRHD 180 ATIFIVMYGL TSLYFAGVMI RLILVATPAI CLISAIAVSA TVKHLTSLLR AEQKVPQTGS 240 SKGPGSSKAS SKVTLDPSQP FQRNGAIALL VGVFYLLTAR GAHGNRIIFD DYCEAYYWLR 300 QNTPTDAKVM SWWDYGYQIT AMGNITVIVD NNTWNNTHIA TVGRAMSSYE DEAYDIMRSL 360 DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVDPVIKEP DYLVNGELRV DKGASPKMLN 420 CLMYKLCYYR FGELVTEYGS QPENSLNFLK GLGLEDPDQR PLPQCLEDRF GRRICASSGS 480 HDLLHLGGVK ADSAELHEDM RTVKKARNCS FTS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR04154 | archaeo_STT3 | 0.0004 | 25 | 105 | 99 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| TIGR04154 | archaeo_STT3 | 0.0001 | 265 | 395 | 158 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| COG1287 | COG1287 | 7.0e-22 | 23 | 404 | 508 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 4.0e-50 | 13 | 436 | 545 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_174675.2 | 7e-26 | 25 | 87 | 166 | 228 | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase [Arabidopsis thaliana] |
| RefSeq | NP_174675.2 | 0 | 95 | 470 | 296 | 716 | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase [Arabidopsis thaliana] |
| RefSeq | XP_002269119.1 | 9e-26 | 25 | 87 | 168 | 230 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002269119.1 | 0 | 95 | 470 | 298 | 718 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318345.1 | 0 | 95 | 470 | 282 | 702 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 7.00649e-44 | 276 | 434 | 35 | 195 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.00008 | 291 | 408 | 6 | 124 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.00008 | 291 | 408 | 6 | 124 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.00008 | 291 | 408 | 6 | 124 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vgp_A | 0.002 | 290 | 391 | 6 | 113 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
