| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra034679 |
| Family | AA1 |
| Protein Properties | Length: 553 Molecular Weight: 61957.5 Isoelectric Point: 9.2152 |
| Chromosome | Chromosome/Scaffold: 05 Start: 20929486 End: 20931878 |
| Description | SKU5 similar 13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 36 | 504 | 0 |
| YGTVAPLGIPQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLLTWSGLQHRKNSWQDGVTGTTCPIPAGTNYTYHFQPKDQIGSYFYYPSTALHRF SGGFGGLRVNSRLLIPVPYADPEDDYTVLINDWYTKSHTALKTFLDSGRTLGSPDGVLINGKSGKVGGPNVPLFTMKPGKTYKYRICNVGFKSTLNFRIQ GHKMKLVEMEGSHVLQNDYDSLDVHVGQCFAVLVTADQNAKNYYMVASTRFLKKEVSTVGVMSYEGSNVQASSELPKAPVGWAWSLNQFRSFRWNLTASA ARPNPQGSYHYGKINITRTIKLANTKNLVNGKVRFGLNGVSHVDTETPLKLAEYFEMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEIVFENH EKSMQSFHLDGYSFFSVASEPGTWTPEKRNNYNLLDAVSRHTVQVFPKSWSAILLTFDNAGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 553 Download |
| MMQGGKLLTV FVCLVSSVAL VNAGDPYFYY TWNVTYGTVA PLGIPQQVIL INGQFPGPNL 60 NSTSNNNVVI NVFNNLDEPF LLTWSGLQHR KNSWQDGVTG TTCPIPAGTN YTYHFQPKDQ 120 IGSYFYYPST ALHRFSGGFG GLRVNSRLLI PVPYADPEDD YTVLINDWYT KSHTALKTFL 180 DSGRTLGSPD GVLINGKSGK VGGPNVPLFT MKPGKTYKYR ICNVGFKSTL NFRIQGHKMK 240 LVEMEGSHVL QNDYDSLDVH VGQCFAVLVT ADQNAKNYYM VASTRFLKKE VSTVGVMSYE 300 GSNVQASSEL PKAPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLANT 360 KNLVNGKVRF GLNGVSHVDT ETPLKLAEYF EMSEKVFKYN VIKDEPAAKI TTLTVEPNVL 420 NITFRTFVEI VFENHEKSMQ SFHLDGYSFF SVASEPGTWT PEKRNNYNLL DAVSRHTVQV 480 FPKSWSAILL TFDNAGMWNI RSENWERRYL GQQMYVSVLS PEKSLRDEYN IPLNTNLCGI 540 VKGLPLPTPY TI* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 2 | 552 | 552 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 7 | 539 | 534 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 18 | 543 | 527 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 15 | 549 | 541 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 7 | 542 | 553 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10639.1 | 0 | 5 | 551 | 3 | 558 | putative pollen specific protein [Arabidopsis thaliana] |
| RefSeq | NP_175953.1 | 0 | 2 | 551 | 1 | 553 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_187948.1 | 0 | 2 | 552 | 1 | 551 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_564697.1 | 0 | 5 | 551 | 3 | 549 | sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Swiss-Prot | Q00624 | 0 | 25 | 550 | 25 | 552 | ASOL_BRANA RecName: Full=L-ascorbate oxidase homolog; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 539 | 5 | 539 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 1asq_A | 0 | 29 | 539 | 5 | 539 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 1asp_B | 0 | 29 | 539 | 5 | 539 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 1asp_A | 0 | 29 | 539 | 5 | 539 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 1aso_B | 0 | 29 | 539 | 5 | 539 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
