| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra034680 |
| Family | AA1 |
| Protein Properties | Length: 554 Molecular Weight: 61755.4 Isoelectric Point: 9.6643 |
| Chromosome | Chromosome/Scaffold: 05 Start: 20934628 End: 20936547 |
| Description | SKU5 similar 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 45 | 502 | 0 |
| PQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYLYYPTTGMHRAAGGYGGLRV NSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGKGDGSDAPLFTLKPGKTYRVRICNVGLKTSINFRIQNHKMKLVEM EGSHVLQNDYDSLDVHVGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVGWAWSLNQFRSFRWNLTASAARPNPQGSY HYGKINITRTIKLVNTQGKVDGKLRYALNGISHTDLETPLKLAEYFGIADKVFKYNSVDNPTPEQTKSIKIEPHGLTFLTSLTAPSSRWCLRTTRRVFSL GTWTVILSSPLRTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 554 Download |
| MRGVKLLAAC LYLAAAATVV VHAEDPYFHH VWNVTYGTAS PLGVPQQVIL INGQFPGPNI 60 NSTSNNNVII NVFNNLDEPF LLTWNGIQHR KNCWQDGTPG TMCPIMPGTN YTYHFQPKDQ 120 IGSYLYYPTT GMHRAAGGYG GLRVNSRLLI PVPYADPEDD YTVLIGDWYT KSHTQLKKFL 180 DGGRTIGRPD GIVINGKSGK GDGSDAPLFT LKPGKTYRVR ICNVGLKTSI NFRIQNHKMK 240 LVEMEGSHVL QNDYDSLDVH VGQCFGTIVT ANQEPKDYYM VASSRFLKTV ITTTGLLRYE 300 GGKGPASSQL PAGPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLVNT 360 QGKVDGKLRY ALNGISHTDL ETPLKLAEYF GIADKVFKYN SVDNPTPEQT KSIKIEPHGL 420 TFLTSLTAPS SRWCLRTTRR VFSLGTWTVI LSSPLRTWTP EKRKNYNLLD AVSRHTVQVY 480 PKCWAAILLT FDNCGMWNVR SENTERRYLG QQLYASVLSP EKSLRDEYNM PETSLQCGLV 540 KNTPKPVNPY AGA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02168 | PLN02168 | 8.0e-166 | 26 | 541 | 537 | + copper ion binding / pectinesterase | ||
| PLN02792 | PLN02792 | 6.0e-167 | 24 | 547 | 532 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 24 | 552 | 547 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 24 | 538 | 527 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 24 | 538 | 525 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA47176.1 | 0 | 1 | 553 | 1 | 554 | Bplo [Brassica napus] |
| EMBL | CAA47177.1 | 0 | 1 | 553 | 1 | 555 | Bplo [Brassica napus] |
| EMBL | CAA47178.1 | 0 | 1 | 553 | 1 | 555 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 3 | 553 | 4 | 555 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Swiss-Prot | Q00624 | 0 | 1 | 553 | 1 | 555 | ASOL_BRANA RecName: Full=L-ascorbate oxidase homolog; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 7.9874e-44 | 29 | 538 | 5 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asq_A | 7.9874e-44 | 29 | 538 | 5 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_B | 7.9874e-44 | 29 | 538 | 5 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_A | 7.9874e-44 | 29 | 538 | 5 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1aso_B | 7.9874e-44 | 29 | 538 | 5 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
