| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra034848 |
| Family | GT1 |
| Protein Properties | Length: 1184 Molecular Weight: 129949 Isoelectric Point: 7.3195 |
| Chromosome | Chromosome/Scaffold: 05 Start: 21704855 End: 21711598 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 224 | 415 | 7e-35 |
| PVPHFCIGPFHKHVSLSSSSLLTQDMTCLAWLDKQEPNSVIYVSLGSIASIDESEFLEIAWGLRNSNQPFLWVVRPGLIRGTEWIENLPKGFIESLEGKG KIVKWAPQIEVLAHRSTGGFLTHCGWNSTIESICEGVPLICKPSFGDQRVNARYISDVWRIGLHLENKIERVEIERAVRTLMKSSEREEIRK | |||
| Full Sequence |
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| Protein Sequence Length: 1184 Download |
| MVIRETKPVI FLFTFPLQGH LNPNFQLANI LCKRGFSITV IHTEFNAPNA SNFPHFTFVS 60 IPDGLSESEA SNPDVIELLH DLNSKCVAPF GDCLKKLLSQ EPTAACVIVD ALWYFTDGLT 120 EKFGIPRMVL RTVNLSAFVA FSKFHVLREK GYLSLQESQA DFPVPELPHL RMKDLPWFQT 180 DDPRSGDKLK KGVLKSLKSS SGIIFNAIED LEAEQLKQSL KEFPVPHFCI GPFHKHVSLS 240 SSSLLTQDMT CLAWLDKQEP NSVIYVSLGS IASIDESEFL EIAWGLRNSN QPFLWVVRPG 300 LIRGTEWIEN LPKGFIESLE GKGKIVKWAP QIEVLAHRST GGFLTHCGWN STIESICEGV 360 PLICKPSFGD QRVNARYISD VWRIGLHLEN KIERVEIERA VRTLMKSSER EEIRKRIMPM 420 KETAEKCLEP GASGGDTVKL FDVSAGAESC DDPCILSYTP TPRSVVNSVK WNHTNMVVAS 480 VGEDKKISLW QKNGKTLGTV PKNSNDINEE CLSAISFSNK GSRYICSGGT GQTVRIWDLQ 540 RKLCIKNLKG HTSTITGVMY NCKDEHVASI SVGGDLIVHN LASGARASEL KDPNGQILKV 600 LDYSRFSRHL LLTAGDDGTV HLWDTTGRNP KMTWLKQHSA PTAGVCFSPS NDKIIASVGL 660 DKKLYTYDSG TRKPSSCISY ESPFSSLAFG DNGHILAAGT GNGRIVFYDV RGKPQPVTVL 720 HAYSSSEAVT SLSWQTSKPV IVNERNCTPE MALFGGTVED SVVIPDPSPA TTSSLASHST 780 VLPGSHGAAS STLNPSSAEE TPKRNHLWPG GPLIRLQAHR ASDSSKDDMD IFSPVVGVQS 840 VEKWSDTEGL KRDHLVLDKR TSSLTFPSSS KGGFPFGDDG NKDWKLSSTS KQDDTRAAFS 900 PFGSTPTALS KNEFSALTPP EAWGGEKFSH LAANDKFSDK FSHLNPPPRL GISSSSASTS 960 GSMYSGSRDF PLSLGQNQTS LANVSISSEF PGVRDFNSKF EKSSTLLADN FPSSPLLTKG 1020 IAAPGNIDSL RLSPSLTRRF STYAERIGDG AFLSSGSPKI KKTGAETREE VLNNLLQRPE 1080 RLAADAAGGL PVMNGGGSLQ QLKQPENNFT LQLFQRTLEG TLDNLKNSVH DDMRNLHIEI 1140 LRQFHMHEME MSTALNSVLE NQAELMKEIK MLRKENQQLR QML* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02534 | PLN02534 | 3.0e-59 | 18 | 433 | 468 | + UDP-glycosyltransferase | ||
| PLN02555 | PLN02555 | 5.0e-60 | 5 | 441 | 465 | + limonoid glucosyltransferase | ||
| PLN02448 | PLN02448 | 4.0e-60 | 15 | 433 | 442 | + UDP-glycosyltransferase family protein | ||
| PLN02562 | PLN02562 | 5.0e-65 | 5 | 418 | 435 | + UDP-glycosyltransferase | ||
| PLN02410 | PLN02410 | 8.0e-109 | 5 | 441 | 448 | + UDP-glucoronosyl/UDP-glucosyl transferase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10802.1 | 0 | 431 | 1161 | 14 | 765 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001119176.1 | 0 | 431 | 1161 | 14 | 760 | NEDD1 (NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1); nucleotide binding [Arabidopsis thaliana] |
| RefSeq | NP_196216.2 | 0 | 431 | 1161 | 14 | 759 | NEDD1 (NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1); nucleotide binding [Arabidopsis thaliana] |
| RefSeq | XP_002277667.1 | 0 | 431 | 1161 | 12 | 782 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315198.1 | 0 | 431 | 1176 | 13 | 777 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2pq6_A | 0 | 7 | 433 | 8 | 465 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 2c9z_A | 2.94273e-44 | 104 | 443 | 113 | 449 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 2c1z_A | 2.94273e-44 | 104 | 443 | 113 | 449 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 2c1x_A | 2.94273e-44 | 104 | 443 | 113 | 449 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3hbj_A | 6.00036e-42 | 10 | 443 | 16 | 451 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DK495701 | 262 | 423 | 679 | 0 |
| DK513383 | 247 | 423 | 664 | 0 |
| DK496186 | 242 | 423 | 659 | 0 |
| FY426695 | 262 | 178 | 439 | 0 |
| FY421748 | 254 | 1 | 254 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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