| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra034983 |
| Family | GH9 |
| Protein Properties | Length: 443 Molecular Weight: 49263.1 Isoelectric Point: 9.2273 |
| Chromosome | Chromosome/Scaffold: 000100 Start: 630651 End: 633176 |
| Description | glycosyl hydrolase 9A4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 281 | 436 | 3.2e-38 |
| GGMIHLRDGANTQYVTATAFLFSAYADILQKYNQKIFCGSKQFDSTHLMAFAKKQIDYILGHNPQGRSYMVGFGPNPPKQAHHRGASVPMSEANEPLSCP LSFVKWFNKNQPNANELTGAIVGGPDRQDNFQDFRWTSVYTEPCTYINSIAVGILA | |||
| GH9 | 33 | 286 | 0 |
| NYKEALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLAGGYYDAGDNVKYGLPMAFTITTLAWSTIYYDKELRASGELENARAAIRWGTDYF LKCASRKNRLYVQVGDPHLDHKCWARPENMQTARTVLQISDKDPGTEIAAETAAALAASSIVFRRIDHKYSRRLLNKAKLLFKLAKSHKGSYDGACPFYC SCSGYNDELLWAATWLYKATRKQVYLSYLKFEAISGYVAEFSWDLKYAGGMIHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 443 Download |
| MGNHGEKERG NVVIRAILLG LISIVCVNGT NINYKEALTK SLIFLEAQRS GKLPPNNRVP 60 WRGDSALDDG KLANVDLAGG YYDAGDNVKY GLPMAFTITT LAWSTIYYDK ELRASGELEN 120 ARAAIRWGTD YFLKCASRKN RLYVQVGDPH LDHKCWARPE NMQTARTVLQ ISDKDPGTEI 180 AAETAAALAA SSIVFRRIDH KYSRRLLNKA KLLFKLAKSH KGSYDGACPF YCSCSGYNDE 240 LLWAATWLYK ATRKQVYLSY LKFEAISGYV AEFSWDLKYA GGMIHLRDGA NTQYVTATAF 300 LFSAYADILQ KYNQKIFCGS KQFDSTHLMA FAKKQIDYIL GHNPQGRSYM VGFGPNPPKQ 360 AHHRGASVPM SEANEPLSCP LSFVKWFNKN QPNANELTGA IVGGPDRQDN FQDFRWTSVY 420 TEPCTYINSI AVGILAKLAA TA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 2.0e-132 | 33 | 439 | 463 | + endoglucanase | ||
| PLN02171 | PLN02171 | 5.0e-136 | 9 | 440 | 492 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-136 | 33 | 436 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 8.0e-146 | 12 | 438 | 474 | + endoglucanase | ||
| PLN02909 | PLN02909 | 0 | 4 | 440 | 484 | + Endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB83158.1 | 0 | 7 | 440 | 5 | 482 | cellulase-like protein [Arabidopsis thaliana] |
| EMBL | CAN82881.1 | 0 | 21 | 439 | 2 | 464 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI20730.1 | 0 | 27 | 432 | 26 | 475 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189972.2 | 0 | 7 | 440 | 5 | 485 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002516149.1 | 0 | 31 | 442 | 29 | 484 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 33 | 440 | 4 | 430 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
| PDB | 1ksc_A | 0 | 33 | 440 | 4 | 430 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
| PDB | 1ks8_A | 0 | 33 | 440 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 32 | 438 | 24 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 32 | 438 | 4 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
