CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra035064
FamilyGT4
Protein PropertiesLength: 407 Molecular Weight: 45275.3 Isoelectric Point: 7.9083
ChromosomeChromosome/Scaffold: 07 Start: 22002223 End: 22003922
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42143728.1976e-43
  FLSINRFEKKKNIDLAVSAFAILCKHKLTLSDDVTLTVAGGYDERLKENVEYLEELKSLAEKEGVSNRVNFITSCSTAERNELLSSCLCVLYTPTDEHFG
  IVPLEAMAAYKPVIACNSGGPVETVKSGATGYLCEPSPEDFSSAMAKFVEDPELARRMG
Full Sequence
Protein Sequence     Length: 407     Download
MAKRKEGSKK MNIAIIHPDL GIGGAERLIV DAAVELASQG HKVHVFTSHH DKSRCFEETL    60
SGIFQVTVYG SFLPRHIFYR LHAVCAYLRC LFVALCVLLG WSSFDVVLAD QVSVVVPLLK    120
LKRSSKVVFY CHFPDLLLAK HTTALRRMYR KPIDFLEEQT TGMADMILVN SNFTASTFAK    180
TFKRLHGRGS RPAVLYPAVN IDQFIEPHTY KLNFLSINRF EKKKNIDLAV SAFAILCKHK    240
LTLSDDVTLT VAGGYDERLK ENVEYLEELK SLAEKEGVSN RVNFITSCST AERNELLSSC    300
LCVLYTPTDE HFGIVPLEAM AAYKPVIACN SGGPVETVKS GATGYLCEPS PEDFSSAMAK    360
FVEDPELARR MGSEARKHVV ESFSAKTFGE KLNQYLVDVV SSPKED* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00534Glycos_transf_15.0e-37214378166+
cd03798GT1_wlbH_like4.0e-4013392397+
COG0438RfaG7.0e-439401402+
cd03801GT1_YqgM_like9.0e-5412392396+
cd03805GT1_ALG2_like011392395+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAC83030.1014061405Similar to gene pi010 glycosyltransferase gi
GenBankAAM26674.1014061403At1g78800/F9K20_16 [Arabidopsis thaliana]
GenBankACU21459.1054063407unknown [Glycine max]
RefSeqNP_178001.2014061403glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002525620.1054063408alpha-1,3-mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A7e-1721436626164A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB2jjm_L0.000000000007214404214390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.000000000007214404214390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.000000000007214404214390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_I0.000000000007214404214390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesisRXN-5462EC-2.4.1.132GDP-Man:Man1GlcNAc2-PP-Dol α-1,3-mannosyltransferase
dolichyl-diphosphooligosaccharide biosynthesisRXN-5463EC-2.4.1.257GDP-Man:Man2GlcNAc2-PP-Dol α-1,6-mannosyltransferase
Transmembrane Domains
StartEnd
87109
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EG522343296823770
DK46473227342760
EG52234227612760
EX08990024512450
EG522342352703040.000009
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis lyrata477043
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Carica papayaevm.model.supercontig_77.17
Capsella rubellaCarubv10022022m
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Medicago truncatulaMedtr1g104880.1
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00056995mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi013830mSi010219m
Selaginella moellendorffii419620
Sorghum bicolorSb06g026860.1
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny