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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra035347 |
Family | GH1 |
Protein Properties | Length: 491 Molecular Weight: 55948.8 Isoelectric Point: 5.3579 |
Chromosome | Chromosome/Scaffold: 000104 Start: 24121 End: 27794 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 18 | 480 | 0 |
RSSFPSTFTFGVATSAYQIEGGWNEGKKGPNIWDKFTHLEGKVLDGSNGDVAVDHYHRYKEDVELIGTLGFSAYRFSISWSRIFPDGLGTEVNEEGVAFY NNLINSLLEKGIEPFVTLYHWDLPSHLQESIGGWTNRKIVDYFGLYADACFASFGDRVKHWITLNEPLQTSVNGHCIGIFAPGRKEKPLVEPYLVSHHQV LAHATAVSIYRSKYKESQGGQIGLSVDCEWAEANSEKMEDKVAAGRRIDFQLGWFLDPLFYGDYPASMRQKLGDNLPTFTPEEREFMLQNSWDFLGVNHY TSRLIAHVSNKEAESDFYQAQELERLVEWEDGEPIGERAASDWLYVVPWGIRRTLNYISKKYNHPPIFITENGMDDEDDGSASMHEMLDDKRRVAYFKSY LANVAEAIKDGVDIKGYFAWSLLDNFEWAQGFTKRFGLVYVDYKNGLSRHPKSSAYWFMKFLK |
Full Sequence |
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Protein Sequence Length: 491 Download |
MAQKLNLPNL AVLPNVNRSS FPSTFTFGVA TSAYQIEGGW NEGKKGPNIW DKFTHLEGKV 60 LDGSNGDVAV DHYHRYKEDV ELIGTLGFSA YRFSISWSRI FPDGLGTEVN EEGVAFYNNL 120 INSLLEKGIE PFVTLYHWDL PSHLQESIGG WTNRKIVDYF GLYADACFAS FGDRVKHWIT 180 LNEPLQTSVN GHCIGIFAPG RKEKPLVEPY LVSHHQVLAH ATAVSIYRSK YKESQGGQIG 240 LSVDCEWAEA NSEKMEDKVA AGRRIDFQLG WFLDPLFYGD YPASMRQKLG DNLPTFTPEE 300 REFMLQNSWD FLGVNHYTSR LIAHVSNKEA ESDFYQAQEL ERLVEWEDGE PIGERAASDW 360 LYVVPWGIRR TLNYISKKYN HPPIFITENG MDDEDDGSAS MHEMLDDKRR VAYFKSYLAN 420 VAEAIKDGVD IKGYFAWSLL DNFEWAQGFT KRFGLVYVDY KNGLSRHPKS SAYWFMKFLK 480 GDEDNKGKKD * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 7.0e-122 | 18 | 479 | 475 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-126 | 18 | 479 | 473 | + beta-glucosidase | ||
COG2723 | BglB | 2.0e-155 | 18 | 475 | 467 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam00232 | Glyco_hydro_1 | 0 | 20 | 475 | 462 | + Glycosyl hydrolase family 1. | ||
TIGR03356 | BGL | 0 | 22 | 475 | 458 | + beta-galactosidase. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 16 | 489 | 18 | 489 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 13 | 489 | 18 | 492 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_001031975.1 | 0 | 1 | 486 | 1 | 486 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_198505.2 | 0 | 1 | 490 | 1 | 490 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270406.1 | 0 | 12 | 490 | 551 | 1027 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 16 | 480 | 12 | 487 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3gnp_A | 0 | 16 | 480 | 12 | 487 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3gno_A | 0 | 16 | 480 | 12 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 1 | 480 | 2 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 1 | 480 | 2 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX119123 | 298 | 1 | 298 | 0 |
FY429396 | 272 | 195 | 466 | 0 |
FY453941 | 268 | 18 | 285 | 0 |
ES903539 | 269 | 18 | 286 | 0 |
EV113964 | 270 | 199 | 468 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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