| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra035431 |
| Family | GT77 |
| Protein Properties | Length: 349 Molecular Weight: 39829.9 Isoelectric Point: 9.5454 |
| Chromosome | Chromosome/Scaffold: 01 Start: 16344106 End: 16348340 |
| Description | RhamnoGalacturonan specific Xylosyltransferase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT77 | 111 | 327 | 0 |
| EKVLVIAEDYALLYKVNEKWPGHAVLIPPALDPKAAHHFGSQGFYNLTSRRPQHLLDILELGYNVMYNDVDMVWLQDPFKYLQGNHDVYFMDDMTAIKPL NHSHGLPPSRNGVTYVCSCMIFLRCTSGAKLLLKKWVEEIRAQPWSNTEAKKPHDQPAFNRALHKTTQIDVYLLPQSAFPSGGLYFKNQKWVNETKGKHV IVHNNYIVGYNNKLKRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MAQQQQRPIS NRPISFLNRN GLFLLLLALL FLLGVYLPLS EAPLFLFPNR TSPSSSPSPS 60 FVVSDWRDYS LAQAAKFVAK NGTVIVCSVS YPFLPFLNNW LISISRQKHH EKVLVIAEDY 120 ALLYKVNEKW PGHAVLIPPA LDPKAAHHFG SQGFYNLTSR RPQHLLDILE LGYNVMYNDV 180 DMVWLQDPFK YLQGNHDVYF MDDMTAIKPL NHSHGLPPSR NGVTYVCSCM IFLRCTSGAK 240 LLLKKWVEEI RAQPWSNTEA KKPHDQPAFN RALHKTTQID VYLLPQSAFP SGGLYFKNQK 300 WVNETKGKHV IVHNNYIVGY NNKLKRFQDF GLWLVDDHSH QSPLGKIE* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 1.0e-45 | 108 | 327 | 226 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB61018.1 | 0 | 48 | 348 | 139 | 444 | A_IG002N01.8 gene product [Arabidopsis thaliana] |
| GenBank | AAT67590.1 | 0 | 66 | 348 | 77 | 361 | hypothetical protein At4G01770 [Arabidopsis thaliana] |
| RefSeq | NP_176048.1 | 0 | 1 | 348 | 1 | 351 | UDP-xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_192086.1 | 0 | 66 | 348 | 77 | 361 | RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_849279.1 | 0 | 48 | 348 | 68 | 360 | unknown protein [Arabidopsis thaliana] |
