| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra036334 |
| Family | GH35 |
| Protein Properties | Length: 731 Molecular Weight: 81017.4 Isoelectric Point: 8.8609 |
| Chromosome | Chromosome/Scaffold: 02 Start: 22522206 End: 22526019 |
| Description | beta-galactosidase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 37 | 339 | 0 |
| VINGHRRILLSGSIHYPRSTPEMWEDLIKKAKDGGLDVIDTYVFWNGHEPSPGTYNFKGRYDLVRFIKTVQEVGLYVHLRIGPYVCAEWNFGGFPVWLKY VPGISFRSDNGPFKAAMQGFTQKIVQMMKEHRFFASQGGPIILSQIENEFGPELKALGPAGHSYVNWAAKMAVGLDTGVPWVMCKEDDAPDPIINACNGF YCDYFTPNKPYKPKMWTEAWSGWFTEFGGTIPKRPVEDLAFGVTRFIQKGGSYINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLVQEPKYSHLKQ LHQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 731 Download |
| MGTTLVLTKI LCFLLITMVI GSAMIQCSIT YDKKAIVING HRRILLSGSI HYPRSTPEMW 60 EDLIKKAKDG GLDVIDTYVF WNGHEPSPGT YNFKGRYDLV RFIKTVQEVG LYVHLRIGPY 120 VCAEWNFGGF PVWLKYVPGI SFRSDNGPFK AAMQGFTQKI VQMMKEHRFF ASQGGPIILS 180 QIENEFGPEL KALGPAGHSY VNWAAKMAVG LDTGVPWVMC KEDDAPDPII NACNGFYCDY 240 FTPNKPYKPK MWTEAWSGWF TEFGGTIPKR PVEDLAFGVT RFIQKGGSYI NYYMYHGGTN 300 FGRTAGGPFI TTSYDYDAPI DEYGLVQEPK YSHLKQLHQA IKQCESALVS SEPKVTKLGN 360 YEEAHVFSAG KGSCVAFLSN YHMNAPAKVV FNNRHYTLPA WSTSILPDCR NVVFNTATVV 420 AKTSQVQMVP SGSILYSVGR YDEDIATYGD RGTITALGLL EQINVTRDTS DYLWYITSVD 480 IKASESFLRG GKWPTLTVDS AGHAVHVFVN GHFYGSAFGT RENRRFSFSA PVNLRGGANR 540 IALLSIAVGL PNVGPHFETW ATGIVGSVAL HGLDGGNKDL SRQTWTYQVG LRGEAMNLIS 600 PSEASSVDWI KGSLAKQNKQ PLTWYKAFFD APRGNEPLAL DLRSMGKGQA WINGQSLGRY 660 WMAFAKGNCG SCNYAGTYRE AKCQSGCGEP TQRWYHVPRS WLKPRGNLIV LFEELGGDVS 720 KVSVVKRSVH * 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-6 | 51 | 187 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 7.0e-23 | 29 | 332 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-164 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 10 | 718 | 713 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL24206.1 | 0 | 1 | 730 | 1 | 732 | At1g45130/F27F5_20 [Arabidopsis thaliana] |
| EMBL | CAB64741.1 | 0 | 1 | 730 | 1 | 732 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_175127.1 | 0 | 1 | 730 | 1 | 732 | BGAL5 (beta-galactosidase 5); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002306893.1 | 0 | 1 | 729 | 1 | 727 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510455.1 | 0 | 7 | 730 | 6 | 728 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 33 | 337 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 9.99995e-41 | 28 | 411 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 9.99995e-41 | 28 | 411 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
