| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra036442 |
| Family | GT14 |
| Protein Properties | Length: 282 Molecular Weight: 32870.2 Isoelectric Point: 10.6116 |
| Chromosome | Chromosome/Scaffold: 07 Start: 468343 End: 469973 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 14 | 211 | 0 |
| EGNVMIVGKPNLVTYRGPTMLATTLHAMALLLRCCRWDWFINLSASDYPLVTQDDLIYAFSELPRDLNFIQHTSRLGWKMNKRGKPIIIDPGLYSLNKSE IWWVIKQRSLPTSFKLFTGSAWTFLSRPFSEYCIIGYDNLPRTLLLYYTNFVSSPEGYFQTLICNSDEFRNTTVNHDLHYIAWDNPPKQHPKTLGTRD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 282 Download |
| MARFVAGELL FQPEGNVMIV GKPNLVTYRG PTMLATTLHA MALLLRCCRW DWFINLSASD 60 YPLVTQDDLI YAFSELPRDL NFIQHTSRLG WKMNKRGKPI IIDPGLYSLN KSEIWWVIKQ 120 RSLPTSFKLF TGSAWTFLSR PFSEYCIIGY DNLPRTLLLY YTNFVSSPEG YFQTLICNSD 180 EFRNTTVNHD LHYIAWDNPP KQHPKTLGTR DYRKMVMSNR PFARKFKGND PVLNRIDREL 240 LRNKRNRVSK PELGPGSGAR RLKSLLLRLM LRRNFVKRQC R* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-53 | 10 | 216 | 212 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 4.0e-128 | 1 | 281 | 298 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK32748.1 | 0 | 1 | 281 | 98 | 378 | AF361580_1 AT3g03690/T12J13_3 [Arabidopsis thaliana] |
| GenBank | AAX33323.1 | 0 | 1 | 281 | 96 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
| RefSeq | NP_187019.1 | 0 | 1 | 281 | 98 | 378 | UNE7 (unfertilized embryo sac 7); acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002270685.1 | 0 | 1 | 281 | 90 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319193.1 | 0 | 1 | 281 | 85 | 363 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DK564120 | 215 | 68 | 282 | 0 |
| EV046750 | 203 | 1 | 203 | 0 |
| FD536707 | 207 | 76 | 282 | 0 |
| EX256269 | 232 | 1 | 232 | 0 |
| DR450602 | 250 | 1 | 249 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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