y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra036447 |
Family | GH1 |
Protein Properties | Length: 522 Molecular Weight: 58776.4 Isoelectric Point: 6.1452 |
Chromosome | Chromosome/Scaffold: 07 Start: 437627 End: 440854 |
Description | beta glucosidase 25 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 37 | 506 | 0 |
GSFPDGFLFGATTSAFQHEGAPEEGGRGLSIWDSFTHQHSEKNNNLLGVDFYHHYKEDVQLLKKLNMDAFRFSISWSRIFPHGKKDKGVSETGVKFFNDL INELIANGVTPVVTLFQWDVPQALEDEYGGFLSDLILEDFREFAKFAFNEYGDRVKHWVTINEPYEFSLGGYGTGEKAPGRCSKYVNEKCVAGDSGHEVY TVSHNLLLAHAEAVEEFRKCAKCKDGKIGIVQSPMWFEPYEKKSSEEIVKRAMDFTLGWHLEPITHGDYPQTMKDSIGARLPSFTDEQKDKLKGSCDFVG VNYFTSAFVAHVEDVDQEKPSWEADSRFKLHLQNPDGYKIGSQPATAKYPVCADGLRKVLKYIKENYNDPEIIITGNGYKETLGEKDALPDALSDSNRKY YHMRHLMALHGAVCEDKVNVKGYFVWSLMDGLEWEDGYKTRSGLYYVDYANNMGRHEKQSAKWLSKLLEK |
Full Sequence |
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Protein Sequence Length: 522 Download |
MALKAILFLG LLLAVISSPT TVDGGSVCPK ASTFGRGSFP DGFLFGATTS AFQHEGAPEE 60 GGRGLSIWDS FTHQHSEKNN NLLGVDFYHH YKEDVQLLKK LNMDAFRFSI SWSRIFPHGK 120 KDKGVSETGV KFFNDLINEL IANGVTPVVT LFQWDVPQAL EDEYGGFLSD LILEDFREFA 180 KFAFNEYGDR VKHWVTINEP YEFSLGGYGT GEKAPGRCSK YVNEKCVAGD SGHEVYTVSH 240 NLLLAHAEAV EEFRKCAKCK DGKIGIVQSP MWFEPYEKKS SEEIVKRAMD FTLGWHLEPI 300 THGDYPQTMK DSIGARLPSF TDEQKDKLKG SCDFVGVNYF TSAFVAHVED VDQEKPSWEA 360 DSRFKLHLQN PDGYKIGSQP ATAKYPVCAD GLRKVLKYIK ENYNDPEIII TGNGYKETLG 420 EKDALPDALS DSNRKYYHMR HLMALHGAVC EDKVNVKGYF VWSLMDGLEW EDGYKTRSGL 480 YYVDYANNMG RHEKQSAKWL SKLLEKAPIQ SKVDLESRKE L* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 4.0e-113 | 34 | 504 | 475 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-116 | 31 | 508 | 483 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-119 | 39 | 505 | 480 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-128 | 40 | 499 | 466 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 5.0e-161 | 35 | 506 | 481 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24252.1 | 0 | 16 | 512 | 15 | 519 | AT3g21370/MHC9_5 [Arabidopsis thaliana] |
DDBJ | BAH20034.1 | 0 | 14 | 506 | 16 | 512 | AT3G09260 [Arabidopsis thaliana] |
RefSeq | NP_187014.1 | 0 | 28 | 521 | 28 | 531 | BGLU25 (BETA GLUCOSIDASE 25); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_187537.1 | 0 | 14 | 506 | 16 | 512 | PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_188774.2 | 0 | 16 | 512 | 15 | 519 | BGLU19 (BETA GLUCOSIDASE 19); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 36 | 506 | 31 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3ptq_A | 0 | 36 | 506 | 31 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3ptm_B | 0 | 36 | 506 | 31 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3ptm_A | 0 | 36 | 506 | 31 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3ptk_B | 0 | 36 | 506 | 31 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |